BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

241 related articles for article (PubMed ID: 29092929)

  • 1. WebMeV: A Cloud Platform for Analyzing and Visualizing Cancer Genomic Data.
    Wang YE; Kutnetsov L; Partensky A; Farid J; Quackenbush J
    Cancer Res; 2017 Nov; 77(21):e11-e14. PubMed ID: 29092929
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The ISB Cancer Genomics Cloud: A Flexible Cloud-Based Platform for Cancer Genomics Research.
    Reynolds SM; Miller M; Lee P; Leinonen K; Paquette SM; Rodebaugh Z; Hahn A; Gibbs DL; Slagel J; Longabaugh WJ; Dhankani V; Reyes M; Pihl T; Backus M; Bookman M; Deflaux N; Bingham J; Pot D; Shmulevich I
    Cancer Res; 2017 Nov; 77(21):e7-e10. PubMed ID: 29092928
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The Cancer Genomics Cloud: Collaborative, Reproducible, and Democratized-A New Paradigm in Large-Scale Computational Research.
    Lau JW; Lehnert E; Sethi A; Malhotra R; Kaushik G; Onder Z; Groves-Kirkby N; Mihajlovic A; DiGiovanna J; Srdic M; Bajcic D; Radenkovic J; Mladenovic V; Krstanovic D; Arsenijevic V; Klisic D; Mitrovic M; Bogicevic I; Kural D; Davis-Dusenbery B;
    Cancer Res; 2017 Nov; 77(21):e3-e6. PubMed ID: 29092927
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.
    Afgan E; Sloggett C; Goonasekera N; Makunin I; Benson D; Crowe M; Gladman S; Kowsar Y; Pheasant M; Horst R; Lonie A
    PLoS One; 2015; 10(10):e0140829. PubMed ID: 26501966
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Cloud Computing with iPlant Atmosphere.
    McKay SJ; Skidmore EJ; LaRose CJ; Mercer AW; Noutsos C
    Curr Protoc Bioinformatics; 2013 Oct; 43():9.15.1-9.15.20. PubMed ID: 26270172
    [TBL] [Abstract][Full Text] [Related]  

  • 6. GenomeVIP: a cloud platform for genomic variant discovery and interpretation.
    Mashl RJ; Scott AD; Huang KL; Wyczalkowski MA; Yoon CJ; Niu B; DeNardo E; Yellapantula VD; Handsaker RE; Chen K; Koboldt DC; Ye K; Fenyö D; Raphael BJ; Wendl MC; Ding L
    Genome Res; 2017 Aug; 27(8):1450-1459. PubMed ID: 28522612
    [TBL] [Abstract][Full Text] [Related]  

  • 7. TCGA4U: A Web-Based Genomic Analysis Platform To Explore And Mine TCGA Genomic Data For Translational Research.
    Huang Z; Duan H; Li H
    Stud Health Technol Inform; 2015; 216():658-62. PubMed ID: 26262133
    [TBL] [Abstract][Full Text] [Related]  

  • 8. VDJServer: A Cloud-Based Analysis Portal and Data Commons for Immune Repertoire Sequences and Rearrangements.
    Christley S; Scarborough W; Salinas E; Rounds WH; Toby IT; Fonner JM; Levin MK; Kim M; Mock SA; Jordan C; Ostmeyer J; Buntzman A; Rubelt F; Davila ML; Monson NL; Scheuermann RH; Cowell LG
    Front Immunol; 2018; 9():976. PubMed ID: 29867956
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Explore, Visualize, and Analyze Functional Cancer Proteomic Data Using the Cancer Proteome Atlas.
    Li J; Akbani R; Zhao W; Lu Y; Weinstein JN; Mills GB; Liang H
    Cancer Res; 2017 Nov; 77(21):e51-e54. PubMed ID: 29092939
    [TBL] [Abstract][Full Text] [Related]  

  • 10. DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes.
    Piñero J; Queralt-Rosinach N; Bravo À; Deu-Pons J; Bauer-Mehren A; Baron M; Sanz F; Furlong LI
    Database (Oxford); 2015; 2015():bav028. PubMed ID: 25877637
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline.
    Agrawal S; Arze C; Adkins RS; Crabtree J; Riley D; Vangala M; Galens K; Fraser CM; Tettelin H; White O; Angiuoli SV; Mahurkar A; Fricke WF
    BMC Genomics; 2017 Apr; 18(1):332. PubMed ID: 28449639
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Cascade: an RNA-seq visualization tool for cancer genomics.
    Shifman AR; Johnson RM; Wilhelm BT
    BMC Genomics; 2016 Jan; 17():75. PubMed ID: 26810393
    [TBL] [Abstract][Full Text] [Related]  

  • 13. CANCERTOOL: A Visualization and Representation Interface to Exploit Cancer Datasets.
    Cortazar AR; Torrano V; Martín-Martín N; Caro-Maldonado A; Camacho L; Hermanova I; Guruceaga E; Lorenzo-Martín LF; Caloto R; Gomis RR; Apaolaza I; Quesada V; Trka J; Gomez-Muñoz A; Vincent S; Bustelo XR; Planes FJ; Aransay AM; Carracedo A
    Cancer Res; 2018 Nov; 78(21):6320-6328. PubMed ID: 30232219
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MC-GenomeKey: a multicloud system for the detection and annotation of genomic variants.
    Elshazly H; Souilmi Y; Tonellato PJ; Wall DP; Abouelhoda M
    BMC Bioinformatics; 2017 Jan; 18(1):49. PubMed ID: 28107819
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A web-based platform for mining pancreatic expression datasets.
    Chelala C; Lemoine NR; Hahn SA; Crnogorac-Jurcevic T
    Pancreatology; 2009; 9(4):340-3. PubMed ID: 19451743
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Using the Seven Bridges Cancer Genomics Cloud to Access and Analyze Petabytes of Cancer Data.
    Malhotra R; Seth I; Lehnert E; Zhao J; Kaushik G; Williams EH; Sethi A; Davis-Dusenbery BN
    Curr Protoc Bioinformatics; 2017 Dec; 60():11.16.1-11.16.32. PubMed ID: 29220078
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Developing Cancer Informatics Applications and Tools Using the NCI Genomic Data Commons API.
    Wilson S; Fitzsimons M; Ferguson M; Heath A; Jensen M; Miller J; Murphy MW; Porter J; Sahni H; Staudt L; Tang Y; Wang Z; Yu C; Zhang J; Ferretti V; Grossman RL;
    Cancer Res; 2017 Nov; 77(21):e15-e18. PubMed ID: 29092930
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Web-TCGA: an online platform for integrated analysis of molecular cancer data sets.
    Deng M; Brägelmann J; Schultze JL; Perner S
    BMC Bioinformatics; 2016 Feb; 17():72. PubMed ID: 26852330
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A survey and evaluation of Web-based tools/databases for variant analysis of TCGA data.
    Zhang Z; Li H; Jiang S; Li R; Li W; Chen H; Bo X
    Brief Bioinform; 2019 Jul; 20(4):1524-1541. PubMed ID: 29617727
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CANEapp: a user-friendly application for automated next generation transcriptomic data analysis.
    Velmeshev D; Lally P; Magistri M; Faghihi MA
    BMC Genomics; 2016 Jan; 17():49. PubMed ID: 26758513
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.