BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

184 related articles for article (PubMed ID: 29104751)

  • 1. Conformation Dynamics of the Intrinsically Disordered Protein c-Myb with the
    Guo X; Han J; Luo R; Chen HF
    RSC Adv; 2017; 7(47):29713-29721. PubMed ID: 29104751
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Test and Evaluation of ff99IDPs Force Field for Intrinsically Disordered Proteins.
    Ye W; Ji D; Wang W; Luo R; Chen HF
    J Chem Inf Model; 2015 May; 55(5):1021-9. PubMed ID: 25919886
    [TBL] [Abstract][Full Text] [Related]  

  • 3. New force field on modeling intrinsically disordered proteins.
    Wang W; Ye W; Jiang C; Luo R; Chen HF
    Chem Biol Drug Des; 2014 Sep; 84(3):253-69. PubMed ID: 24589355
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Conformational Preferences of an Intrinsically Disordered Protein Domain: A Case Study for Modern Force Fields.
    Gopal SM; Wingbermühle S; Schnatwinkel J; Juber S; Herrmann C; Schäfer LV
    J Phys Chem B; 2021 Jan; 125(1):24-35. PubMed ID: 33382616
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Order-disorder transition of intrinsically disordered kinase inducible transactivation domain of CREB.
    Liu H; Guo X; Han J; Luo R; Chen HF
    J Chem Phys; 2018 Jun; 148(22):225101. PubMed ID: 29907037
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Balanced Solvent Model for Intrinsically Disordered and Ordered Proteins.
    Mu J; Pan Z; Chen HF
    J Chem Inf Model; 2021 Oct; 61(10):5141-5151. PubMed ID: 34546059
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The IDP-Specific Force Field ff14IDPSFF Improves the Conformer Sampling of Intrinsically Disordered Proteins.
    Song D; Luo R; Chen HF
    J Chem Inf Model; 2017 May; 57(5):1166-1178. PubMed ID: 28448138
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Conformational propensities of intrinsically disordered proteins influence the mechanism of binding and folding.
    Arai M; Sugase K; Dyson HJ; Wright PE
    Proc Natl Acad Sci U S A; 2015 Aug; 112(31):9614-9. PubMed ID: 26195786
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Molecular dynamics simulations of the adsorption of an intrinsically disordered protein: Force field and water model evaluation in comparison with experiments.
    Koder Hamid M; Månsson LK; Meklesh V; Persson P; Skepö M
    Front Mol Biosci; 2022; 9():958175. PubMed ID: 36387274
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Simulation of coupled folding and binding of an intrinsically disordered protein in explicit solvent with metadynamics.
    Han M; Xu J; Ren Y; Li J
    J Mol Graph Model; 2016 Jul; 68():114-127. PubMed ID: 27423742
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparison and Evaluation of Force Fields for Intrinsically Disordered Proteins.
    Rahman MU; Rehman AU; Liu H; Chen HF
    J Chem Inf Model; 2020 Oct; 60(10):4912-4923. PubMed ID: 32816485
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Residue-Specific Force Field Improving the Sample of Intrinsically Disordered Proteins and Folded Proteins.
    Yang S; Liu H; Zhang Y; Lu H; Chen H
    J Chem Inf Model; 2019 Nov; 59(11):4793-4805. PubMed ID: 31613621
    [TBL] [Abstract][Full Text] [Related]  

  • 13. General Purpose Water Model Can Improve Atomistic Simulations of Intrinsically Disordered Proteins.
    Shabane PS; Izadi S; Onufriev AV
    J Chem Theory Comput; 2019 Apr; 15(4):2620-2634. PubMed ID: 30865832
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Intrinsically disordered protein-specific force field CHARMM36IDPSFF.
    Liu H; Song D; Lu H; Luo R; Chen HF
    Chem Biol Drug Des; 2018 Oct; 92(4):1722-1735. PubMed ID: 29808548
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Molecular Recognition by Templated Folding of an Intrinsically Disordered Protein.
    Toto A; Camilloni C; Giri R; Brunori M; Vendruscolo M; Gianni S
    Sci Rep; 2016 Feb; 6():21994. PubMed ID: 26912067
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Extensive tests and evaluation of the CHARMM36IDPSFF force field for intrinsically disordered proteins and folded proteins.
    Liu H; Song D; Zhang Y; Yang S; Luo R; Chen HF
    Phys Chem Chem Phys; 2019 Oct; 21(39):21918-21931. PubMed ID: 31552948
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Performance evaluation of the balanced force field ff03CMAP for intrinsically disordered and ordered proteins.
    Jiang Y; Chen HF
    Phys Chem Chem Phys; 2022 Dec; 24(48):29870-29881. PubMed ID: 36468450
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structured and Unstructured Binding of an Intrinsically Disordered Protein as Revealed by Atomistic Simulations.
    Ithuralde RE; Roitberg AE; Turjanski AG
    J Am Chem Soc; 2016 Jul; 138(28):8742-51. PubMed ID: 27348048
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Choice of Force Field for Proteins Containing Structured and Intrinsically Disordered Regions.
    Zapletal V; Mládek A; Melková K; Louša P; Nomilner E; Jaseňáková Z; Kubáň V; Makovická M; Laníková A; Žídek L; Hritz J
    Biophys J; 2020 Apr; 118(7):1621-1633. PubMed ID: 32367806
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Well-Balanced Force Field
    Zhang Y; Liu H; Yang S; Luo R; Chen HF
    J Chem Theory Comput; 2019 Dec; 15(12):6769-6780. PubMed ID: 31657215
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.