BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

244 related articles for article (PubMed ID: 29130215)

  • 41. Design and bioinformatics analysis of genome-wide CLIP experiments.
    Wang T; Xiao G; Chu Y; Zhang MQ; Corey DR; Xie Y
    Nucleic Acids Res; 2015 Jun; 43(11):5263-74. PubMed ID: 25958398
    [TBL] [Abstract][Full Text] [Related]  

  • 42. iCLIP data analysis: A complete pipeline from sequencing reads to RBP binding sites.
    Busch A; Brüggemann M; Ebersberger S; Zarnack K
    Methods; 2020 Jun; 178():49-62. PubMed ID: 31751605
    [TBL] [Abstract][Full Text] [Related]  

  • 43. CLIPing the brain: studies of protein-RNA interactions important for neurodegenerative disorders.
    Modic M; Ule J; Sibley CR
    Mol Cell Neurosci; 2013 Sep; 56():429-35. PubMed ID: 23583633
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.
    Meyer K; Köster T; Nolte C; Weinholdt C; Lewinski M; Grosse I; Staiger D
    Genome Biol; 2017 Oct; 18(1):204. PubMed ID: 29084609
    [TBL] [Abstract][Full Text] [Related]  

  • 45. CLIP: construction of cDNA libraries for high-throughput sequencing from RNAs cross-linked to proteins in vivo.
    Wang Z; Tollervey J; Briese M; Turner D; Ule J
    Methods; 2009 Jul; 48(3):287-93. PubMed ID: 19272451
    [TBL] [Abstract][Full Text] [Related]  

  • 46. iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.
    König J; Zarnack K; Rot G; Curk T; Kayikci M; Zupan B; Turner DJ; Luscombe NM; Ule J
    Nat Struct Mol Biol; 2010 Jul; 17(7):909-15. PubMed ID: 20601959
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Systematic identification of NF90 target RNAs by iCLIP analysis.
    Lodde V; Floris M; Munk R; Martindale JL; Piredda D; Napodano CMP; Cucca F; Uzzau S; Abdelmohsen K; Gorospe M; Noh JH; Idda ML
    Sci Rep; 2022 Jan; 12(1):364. PubMed ID: 35013429
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Analysis of HIV-1 Gag-RNA Interactions in Cells and Virions by CLIP-seq.
    Kutluay SB; Bieniasz PD
    Methods Mol Biol; 2016; 1354():119-31. PubMed ID: 26714708
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Using Native RIP, UV-CLIP or fCLIP to Address Protein-RNA Interactions In Vivo.
    Baldini L; Labialle S
    Methods Mol Biol; 2021; 2300():89-98. PubMed ID: 33792874
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Global identification of RsmA/N binding sites in
    Chihara K; Barquist L; Takasugi K; Noda N; Tsuneda S
    RNA Biol; 2021 Dec; 18(12):2401-2416. PubMed ID: 33866926
    [No Abstract]   [Full Text] [Related]  

  • 51. Quick-irCLIP: Interrogating protein-RNA interactions using a rapid and simple cross-linking and immunoprecipitation technique.
    Kaczynski T; Hussain A; Farkas M
    MethodsX; 2019; 6():1292-1304. PubMed ID: 31205862
    [TBL] [Abstract][Full Text] [Related]  

  • 52. CLIP (cross-linking and immunoprecipitation) identification of RNAs bound by a specific protein.
    Darnell RB
    Cold Spring Harb Protoc; 2012 Nov; 2012(11):1146-60. PubMed ID: 23118367
    [TBL] [Abstract][Full Text] [Related]  

  • 53. PAR-CLIP: A Method for Transcriptome-Wide Identification of RNA Binding Protein Interaction Sites.
    Danan C; Manickavel S; Hafner M
    Methods Mol Biol; 2016; 1358():153-73. PubMed ID: 26463383
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Monitored eCLIP: high accuracy mapping of RNA-protein interactions.
    Hocq R; Paternina J; Alasseur Q; Genovesio A; Le Hir H
    Nucleic Acids Res; 2018 Nov; 46(21):11553-11565. PubMed ID: 30252095
    [TBL] [Abstract][Full Text] [Related]  

  • 55. A Pipeline for Analyzing eCLIP and iCLIP Data with Htseq-clip and DEWSeq.
    Sahadevan S; Sekaran T; Schwarzl T
    Methods Mol Biol; 2022; 2404():189-205. PubMed ID: 34694610
    [TBL] [Abstract][Full Text] [Related]  

  • 56. UV-RNA Immunoprecipitation (UV-RIP) Protocol in Neurons.
    Schaukowitch K; Joo JY; Kim TK
    Methods Mol Biol; 2017; 1468():33-8. PubMed ID: 27662868
    [TBL] [Abstract][Full Text] [Related]  

  • 57. sCLIP-an integrated platform to study RNA-protein interactomes in biomedical research: identification of CSTF2tau in alternative processing of small nuclear RNAs.
    Kargapolova Y; Levin M; Lackner K; Danckwardt S
    Nucleic Acids Res; 2017 Jun; 45(10):6074-6086. PubMed ID: 28334977
    [TBL] [Abstract][Full Text] [Related]  

  • 58. The Future of Cross-Linking and Immunoprecipitation (CLIP).
    Ule J; Hwang HW; Darnell RB
    Cold Spring Harb Perspect Biol; 2018 Aug; 10(8):. PubMed ID: 30068528
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Transcriptome-wide identification of in vivo interactions between RNAs and RNA-binding proteins by RIP and PAR-CLIP assays.
    González-Buendía E; Saldaña-Meyer R; Meier K; Recillas-Targa F
    Methods Mol Biol; 2015; 1288():413-28. PubMed ID: 25827894
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Dual cross-linking ribonucleoprotein immunoprecipitation assay.
    Khan DH; Davie JR
    Biochem Cell Biol; 2014 Aug; 92(4):317-9. PubMed ID: 24935679
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 13.