BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

177 related articles for article (PubMed ID: 29146583)

  • 1. Comparison of ChIP-Seq Data and a Reference Motif Set for Human KRAB C2H2 Zinc Finger Proteins.
    Barazandeh M; Lambert SA; Albu M; Hughes TR
    G3 (Bethesda); 2018 Jan; 8(1):219-229. PubMed ID: 29146583
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of C2H2-ZF binding preferences from ChIP-seq data using RCADE.
    Najafabadi HS; Albu M; Hughes TR
    Bioinformatics; 2015 Sep; 31(17):2879-81. PubMed ID: 25953800
    [TBL] [Abstract][Full Text] [Related]  

  • 3. C2H2 zinc finger proteins greatly expand the human regulatory lexicon.
    Najafabadi HS; Mnaimneh S; Schmitges FW; Garton M; Lam KN; Yang A; Albu M; Weirauch MT; Radovani E; Kim PM; Greenblatt J; Frey BJ; Hughes TR
    Nat Biotechnol; 2015 May; 33(5):555-62. PubMed ID: 25690854
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computational Methods for Analysis of the DNA-Binding Preferences of Cys2His2 Zinc-Finger Proteins.
    Doğan B; Najafabadi HS
    Methods Mol Biol; 2018; 1867():15-28. PubMed ID: 30155812
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Multiparameter functional diversity of human C2H2 zinc finger proteins.
    Schmitges FW; Radovani E; Najafabadi HS; Barazandeh M; Campitelli LF; Yin Y; Jolma A; Zhong G; Guo H; Kanagalingam T; Dai WF; Taipale J; Emili A; Greenblatt JF; Hughes TR
    Genome Res; 2016 Dec; 26(12):1742-1752. PubMed ID: 27852650
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Evolution of KRAB-containing zinc finger proteins and their roles in species evolution.
    Wang J; Wang J; Tian CY
    Yi Chuan; 2016 Nov; 38(11):971-978. PubMed ID: 27867147
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Motif oriented high-resolution analysis of ChIP-seq data reveals the topological order of CTCF and cohesin proteins on DNA.
    Nagy G; Czipa E; Steiner L; Nagy T; Pongor S; Nagy L; Barta E
    BMC Genomics; 2016 Aug; 17(1):637. PubMed ID: 27526722
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SMiLE-seq identifies binding motifs of single and dimeric transcription factors.
    Isakova A; Groux R; Imbeault M; Rainer P; Alpern D; Dainese R; Ambrosini G; Trono D; Bucher P; Deplancke B
    Nat Methods; 2017 Mar; 14(3):316-322. PubMed ID: 28092692
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A common DNA-binding site for SZF1 and the BRCA1-associated zinc finger protein, ZBRK1.
    Peng H; Zheng L; Lee WH; Rux JJ; Rauscher FJ
    Cancer Res; 2002 Jul; 62(13):3773-81. PubMed ID: 12097288
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Nizp1, a novel multitype zinc finger protein that interacts with the NSD1 histone lysine methyltransferase through a unique C2HR motif.
    Nielsen AL; Jørgensen P; Lerouge T; Cerviño M; Chambon P; Losson R
    Mol Cell Biol; 2004 Jun; 24(12):5184-96. PubMed ID: 15169884
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Non-base-contacting residues enable kaleidoscopic evolution of metazoan C2H2 zinc finger DNA binding.
    Najafabadi HS; Garton M; Weirauch MT; Mnaimneh S; Yang A; Kim PM; Hughes TR
    Genome Biol; 2017 Sep; 18(1):167. PubMed ID: 28877740
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs.
    O'Geen H; Squazzo SL; Iyengar S; Blahnik K; Rinn JL; Chang HY; Green R; Farnham PJ
    PLoS Genet; 2007 Jun; 3(6):e89. PubMed ID: 17542650
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sequence-specific transcriptional repression by KS1, a multiple-zinc-finger-Krüppel-associated box protein.
    Gebelein B; Urrutia R
    Mol Cell Biol; 2001 Feb; 21(3):928-39. PubMed ID: 11154279
    [TBL] [Abstract][Full Text] [Related]  

  • 14. KRAB-independent suppression of neoplastic cell growth by the novel zinc finger transcription factor KS1.
    Gebelein B; Fernandez-Zapico M; Imoto M; Urrutia R
    J Clin Invest; 1998 Dec; 102(11):1911-9. PubMed ID: 9835615
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparative analysis of KRAB zinc finger proteins in rodents and man: evidence for several evolutionarily distinct subfamilies of KRAB zinc finger genes.
    Mark C; Abrink M; Hellman L
    DNA Cell Biol; 1999 May; 18(5):381-96. PubMed ID: 10360839
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263.
    Frietze S; Lan X; Jin VX; Farnham PJ
    J Biol Chem; 2010 Jan; 285(2):1393-403. PubMed ID: 19887448
    [TBL] [Abstract][Full Text] [Related]  

  • 17. KRAB zinc finger proteins: an analysis of the molecular mechanisms governing their increase in numbers and complexity during evolution.
    Looman C; Abrink M; Mark C; Hellman L
    Mol Biol Evol; 2002 Dec; 19(12):2118-30. PubMed ID: 12446804
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The Arms Race Between KRAB-Zinc Finger Proteins and Endogenous Retroelements and Its Impact on Mammals.
    Bruno M; Mahgoub M; Macfarlan TS
    Annu Rev Genet; 2019 Dec; 53():393-416. PubMed ID: 31518518
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome-wide study of C2H2 zinc finger gene family in Medicago truncatula.
    Jiao Z; Wang L; Du H; Wang Y; Wang W; Liu J; Huang J; Huang W; Ge L
    BMC Plant Biol; 2020 Aug; 20(1):401. PubMed ID: 32867687
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification of ZBTB24 protein domains and motifs for heterochromatin localization and transcriptional activation.
    Aktar S; Sasaki H; Unoki M
    Genes Cells; 2019 Nov; 24(11):746-755. PubMed ID: 31561277
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.