251 related articles for article (PubMed ID: 29187214)
1. Synthetic enhancer design by in silico compensatory evolution reveals flexibility and constraint in cis-regulation.
Barr KA; Martinez C; Moran JR; Kim AR; Ramos AF; Reinitz J
BMC Syst Biol; 2017 Nov; 11(1):116. PubMed ID: 29187214
[TBL] [Abstract][Full Text] [Related]
2. Hunchback is counter-repressed to regulate even-skipped stripe 2 expression in Drosophila embryos.
Vincent BJ; Staller MV; Lopez-Rivera F; Bragdon MDJ; Pym ECG; Biette KM; Wunderlich Z; Harden TT; Estrada J; DePace AH
PLoS Genet; 2018 Sep; 14(9):e1007644. PubMed ID: 30192762
[TBL] [Abstract][Full Text] [Related]
3. Functional analysis of eve stripe 2 enhancer evolution in Drosophila: rules governing conservation and change.
Ludwig MZ; Patel NH; Kreitman M
Development; 1998 Mar; 125(5):949-58. PubMed ID: 9449677
[TBL] [Abstract][Full Text] [Related]
4. Impacts of the ubiquitous factor Zelda on Bicoid-dependent DNA binding and transcription in Drosophila.
Xu Z; Chen H; Ling J; Yu D; Struffi P; Small S
Genes Dev; 2014 Mar; 28(6):608-21. PubMed ID: 24637116
[TBL] [Abstract][Full Text] [Related]
5. Rearrangements of 2.5 kilobases of noncoding DNA from the Drosophila even-skipped locus define predictive rules of genomic cis-regulatory logic.
Kim AR; Martinez C; Ionides J; Ramos AF; Ludwig MZ; Ogawa N; Sharp DH; Reinitz J
PLoS Genet; 2013; 9(2):e1003243. PubMed ID: 23468638
[TBL] [Abstract][Full Text] [Related]
6. Consequences of eukaryotic enhancer architecture for gene expression dynamics, development, and fitness.
Ludwig MZ; Manu ; Kittler R; White KP; Kreitman M
PLoS Genet; 2011 Nov; 7(11):e1002364. PubMed ID: 22102826
[TBL] [Abstract][Full Text] [Related]
7. Bicoid occurrence and Bicoid-dependent hunchback regulation in lower cyclorrhaphan flies.
Lemke S; Stauber M; Shaw PJ; Rafiqi AM; Prell A; Schmidt-Ott U
Evol Dev; 2008; 10(4):413-20. PubMed ID: 18638318
[TBL] [Abstract][Full Text] [Related]
8. A synthetic biology approach to the development of transcriptional regulatory models and custom enhancer design.
Martinez CA; Barr KA; Kim AR; Reinitz J
Methods; 2013 Jul; 62(1):91-8. PubMed ID: 23732772
[TBL] [Abstract][Full Text] [Related]
9. Evolutionary and functional analysis of the tailless enhancer in Musca domestica and Drosophila melanogaster.
Wratten NS; McGregor AP; Shaw PJ; Dover GA
Evol Dev; 2006; 8(1):6-15. PubMed ID: 16409378
[TBL] [Abstract][Full Text] [Related]
10. Quantitative dissection of transcription in development yields evidence for transcription-factor-driven chromatin accessibility.
Eck E; Liu J; Kazemzadeh-Atoufi M; Ghoreishi S; Blythe SA; Garcia HG
Elife; 2020 Oct; 9():. PubMed ID: 33074101
[TBL] [Abstract][Full Text] [Related]
11. Molecular dissection of cis-regulatory modules at the Drosophila bithorax complex reveals critical transcription factor signature motifs.
Starr MO; Ho MC; Gunther EJ; Tu YK; Shur AS; Goetz SE; Borok MJ; Kang V; Drewell RA
Dev Biol; 2011 Nov; 359(2):290-302. PubMed ID: 21821017
[TBL] [Abstract][Full Text] [Related]
12. Organization of developmental enhancers in the Drosophila embryo.
Papatsenko D; Goltsev Y; Levine M
Nucleic Acids Res; 2009 Sep; 37(17):5665-77. PubMed ID: 19651877
[TBL] [Abstract][Full Text] [Related]
13. Anterior repression of a Drosophila stripe enhancer requires three position-specific mechanisms.
Andrioli LP; Vasisht V; Theodosopoulou E; Oberstein A; Small S
Development; 2002 Nov; 129(21):4931-40. PubMed ID: 12397102
[TBL] [Abstract][Full Text] [Related]
14. Precision of hunchback expression in the Drosophila embryo.
Perry MW; Bothma JP; Luu RD; Levine M
Curr Biol; 2012 Dec; 22(23):2247-52. PubMed ID: 23122844
[TBL] [Abstract][Full Text] [Related]
15. Bicoid-Dependent Activation of the Target Gene hunchback Requires a Two-Motif Sequence Code in a Specific Basal Promoter.
Ling J; Umezawa KY; Scott T; Small S
Mol Cell; 2019 Sep; 75(6):1178-1187.e4. PubMed ID: 31402096
[TBL] [Abstract][Full Text] [Related]
16. Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation.
Hare EE; Peterson BK; Iyer VN; Meier R; Eisen MB
PLoS Genet; 2008 Jun; 4(6):e1000106. PubMed ID: 18584029
[TBL] [Abstract][Full Text] [Related]
17. Functional regulatory evolution outside of the minimal
Crocker J; Stern DL
Development; 2017 Sep; 144(17):3095-3101. PubMed ID: 28760812
[TBL] [Abstract][Full Text] [Related]
18. A Mutation in the
López-Rivera F; Foster Rhoades OK; Vincent BJ; Pym ECG; Bragdon MDJ; Estrada J; DePace AH; Wunderlich Z
G3 (Bethesda); 2020 Dec; 10(12):4473-4482. PubMed ID: 33037064
[TBL] [Abstract][Full Text] [Related]
19. Dynamic multifactor hubs interact transiently with sites of active transcription in
Mir M; Stadler MR; Ortiz SA; Hannon CE; Harrison MM; Darzacq X; Eisen MB
Elife; 2018 Dec; 7():. PubMed ID: 30589412
[TBL] [Abstract][Full Text] [Related]
20. Regulation of two pair-rule stripes by a single enhancer in the Drosophila embryo.
Small S; Blair A; Levine M
Dev Biol; 1996 May; 175(2):314-24. PubMed ID: 8626035
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]