BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

572 related articles for article (PubMed ID: 29217590)

  • 1. A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
    Gassler J; Brandão HB; Imakaev M; Flyamer IM; Ladstätter S; Bickmore WA; Peters JM; Mirny LA; Tachibana K
    EMBO J; 2017 Dec; 36(24):3600-3618. PubMed ID: 29217590
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
    Wutz G; Várnai C; Nagasaka K; Cisneros DA; Stocsits RR; Tang W; Schoenfelder S; Jessberger G; Muhar M; Hossain MJ; Walther N; Koch B; Kueblbeck M; Ellenberg J; Zuber J; Fraser P; Peters JM
    EMBO J; 2017 Dec; 36(24):3573-3599. PubMed ID: 29217591
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesin
    Wutz G; Ladurner R; St Hilaire BG; Stocsits RR; Nagasaka K; Pignard B; Sanborn A; Tang W; Várnai C; Ivanov MP; Schoenfelder S; van der Lelij P; Huang X; Dürnberger G; Roitinger E; Mechtler K; Davidson IF; Fraser P; Lieberman-Aiden E; Peters JM
    Elife; 2020 Feb; 9():. PubMed ID: 32065581
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Studying meiotic cohesin in somatic cells reveals that Rec8-containing cohesin requires Stag3 to function and is regulated by Wapl and sororin.
    Wolf PG; Cuba Ramos A; Kenzel J; Neumann B; Stemmann O
    J Cell Sci; 2018 Jun; 131(11):. PubMed ID: 29724914
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A Surveillance Mechanism Ensures Repair of DNA Lesions during Zygotic Reprogramming.
    Ladstätter S; Tachibana-Konwalski K
    Cell; 2016 Dec; 167(7):1774-1787.e13. PubMed ID: 27916276
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The Cohesin Release Factor WAPL Restricts Chromatin Loop Extension.
    Haarhuis JHI; van der Weide RH; Blomen VA; Yáñez-Cuna JO; Amendola M; van Ruiten MS; Krijger PHL; Teunissen H; Medema RH; van Steensel B; Brummelkamp TR; de Wit E; Rowland BD
    Cell; 2017 May; 169(4):693-707.e14. PubMed ID: 28475897
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Prophase pathway-dependent removal of cohesin from human chromosomes requires opening of the Smc3-Scc1 gate.
    Buheitel J; Stemmann O
    EMBO J; 2013 Mar; 32(5):666-76. PubMed ID: 23361318
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Absolute quantification of cohesin, CTCF and their regulators in human cells.
    Holzmann J; Politi AZ; Nagasaka K; Hantsche-Grininger M; Walther N; Koch B; Fuchs J; Dürnberger G; Tang W; Ladurner R; Stocsits RR; Busslinger GA; Novák B; Mechtler K; Davidson IF; Ellenberg J; Peters JM
    Elife; 2019 Jun; 8():. PubMed ID: 31204999
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The Energetics and Physiological Impact of Cohesin Extrusion.
    Vian L; Pękowska A; Rao SSP; Kieffer-Kwon KR; Jung S; Baranello L; Huang SC; El Khattabi L; Dose M; Pruett N; Sanborn AL; Canela A; Maman Y; Oksanen A; Resch W; Li X; Lee B; Kovalchuk AL; Tang Z; Nelson S; Di Pierro M; Cheng RR; Machol I; St Hilaire BG; Durand NC; Shamim MS; Stamenova EK; Onuchic JN; Ruan Y; Nussenzweig A; Levens D; Aiden EL; Casellas R
    Cell; 2018 May; 173(5):1165-1178.e20. PubMed ID: 29706548
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Characterization of a DNA exit gate in the human cohesin ring.
    Huis in 't Veld PJ; Herzog F; Ladurner R; Davidson IF; Piric S; Kreidl E; Bhaskara V; Aebersold R; Peters JM
    Science; 2014 Nov; 346(6212):968-72. PubMed ID: 25414306
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Chromatin jets define the properties of cohesin-driven in vivo loop extrusion.
    Guo Y; Al-Jibury E; Garcia-Millan R; Ntagiantas K; King JWD; Nash AJ; Galjart N; Lenhard B; Rueckert D; Fisher AG; Pruessner G; Merkenschlager M
    Mol Cell; 2022 Oct; 82(20):3769-3780.e5. PubMed ID: 36182691
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Releasing cohesin from chromosome arms in early mitosis: opposing actions of Wapl-Pds5 and Sgo1.
    Shintomi K; Hirano T
    Genes Dev; 2009 Sep; 23(18):2224-36. PubMed ID: 19696148
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Wapl releases Scc1-cohesin and regulates chromosome structure and segregation in mouse oocytes.
    Silva MCC; Powell S; Ladstätter S; Gassler J; Stocsits R; Tedeschi A; Peters JM; Tachibana K
    J Cell Biol; 2020 Apr; 219(4):. PubMed ID: 32328639
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Cohesin Loss Eliminates All Loop Domains.
    Rao SSP; Huang SC; Glenn St Hilaire B; Engreitz JM; Perez EM; Kieffer-Kwon KR; Sanborn AL; Johnstone SE; Bascom GD; Bochkov ID; Huang X; Shamim MS; Shin J; Turner D; Ye Z; Omer AD; Robinson JT; Schlick T; Bernstein BE; Casellas R; Lander ES; Aiden EL
    Cell; 2017 Oct; 171(2):305-320.e24. PubMed ID: 28985562
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The structural basis for cohesin-CTCF-anchored loops.
    Li Y; Haarhuis JHI; Sedeño Cacciatore Á; Oldenkamp R; van Ruiten MS; Willems L; Teunissen H; Muir KW; de Wit E; Rowland BD; Panne D
    Nature; 2020 Feb; 578(7795):472-476. PubMed ID: 31905366
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Transcription shapes 3D chromatin organization by interacting with loop extrusion.
    Banigan EJ; Tang W; van den Berg AA; Stocsits RR; Wutz G; Brandão HB; Busslinger GA; Peters JM; Mirny LA
    Proc Natl Acad Sci U S A; 2023 Mar; 120(11):e2210480120. PubMed ID: 36897969
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Wapl controls the dynamic association of cohesin with chromatin.
    Kueng S; Hegemann B; Peters BH; Lipp JJ; Schleiffer A; Mechtler K; Peters JM
    Cell; 2006 Dec; 127(5):955-67. PubMed ID: 17113138
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Attraction and disruption: how loop extrusion and compartmentalisation shape the nuclear genome.
    Magnitov M; de Wit E
    Curr Opin Genet Dev; 2024 Jun; 86():102194. PubMed ID: 38636335
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Chromatin organization by an interplay of loop extrusion and compartmental segregation.
    Nuebler J; Fudenberg G; Imakaev M; Abdennur N; Mirny LA
    Proc Natl Acad Sci U S A; 2018 Jul; 115(29):E6697-E6706. PubMed ID: 29967174
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl.
    Busslinger GA; Stocsits RR; van der Lelij P; Axelsson E; Tedeschi A; Galjart N; Peters JM
    Nature; 2017 Apr; 544(7651):503-507. PubMed ID: 28424523
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 29.