BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

313 related articles for article (PubMed ID: 29220491)

  • 1. CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations.
    Wang X; Zheng Z; Cai Y; Chen T; Li C; Fu W; Jiang Y
    Gigascience; 2017 Dec; 6(12):1-12. PubMed ID: 29220491
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Noise cancellation using total variation for copy number variation detection.
    Zare F; Hosny A; Nabavi S
    BMC Bioinformatics; 2018 Oct; 19(Suppl 11):361. PubMed ID: 30343665
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A remark on copy number variation detection methods.
    Li S; Dou X; Gao R; Ge X; Qian M; Wan L
    PLoS One; 2018; 13(4):e0196226. PubMed ID: 29702671
    [TBL] [Abstract][Full Text] [Related]  

  • 4. CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing.
    Abyzov A; Urban AE; Snyder M; Gerstein M
    Genome Res; 2011 Jun; 21(6):974-84. PubMed ID: 21324876
    [TBL] [Abstract][Full Text] [Related]  

  • 5. iCopyDAV: Integrated platform for copy number variations-Detection, annotation and visualization.
    Dharanipragada P; Vogeti S; Parekh N
    PLoS One; 2018; 13(4):e0195334. PubMed ID: 29621297
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison of sequencing based CNV discovery methods using monozygotic twin quartets.
    Legault MA; Girard S; Lemieux Perreault LP; Rouleau GA; Dubé MP
    PLoS One; 2015; 10(3):e0122287. PubMed ID: 25812131
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An evaluation of copy number variation detection tools for cancer using whole exome sequencing data.
    Zare F; Dow M; Monteleone N; Hosny A; Nabavi S
    BMC Bioinformatics; 2017 May; 18(1):286. PubMed ID: 28569140
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Evaluation of somatic copy number estimation tools for whole-exome sequencing data.
    Nam JY; Kim NK; Kim SC; Joung JG; Xi R; Lee S; Park PJ; Park WY
    Brief Bioinform; 2016 Mar; 17(2):185-92. PubMed ID: 26210357
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SeqCNV: a novel method for identification of copy number variations in targeted next-generation sequencing data.
    Chen Y; Zhao L; Wang Y; Cao M; Gelowani V; Xu M; Agrawal SA; Li Y; Daiger SP; Gibbs R; Wang F; Chen R
    BMC Bioinformatics; 2017 Mar; 18(1):147. PubMed ID: 28253855
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SILO: A Computational Method for Detecting Copy Number Gain in Clinical Specimens Analyzed on a Next-Generation Sequencing Platform.
    Miller N; Bouma M; Sabatini L; Gulukota K
    J Mol Diagn; 2021 Oct; 23(10):1241-1248. PubMed ID: 34365010
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genome-Wide Copy Number Variation Detection Using NGS: Data Analysis and Interpretation.
    Shen W; Szankasi P; Durtschi J; Kelley TW; Xu X
    Methods Mol Biol; 2019; 1908():113-124. PubMed ID: 30649724
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evaluation of copy number variant detection from panel-based next-generation sequencing data.
    Yao R; Yu T; Qing Y; Wang J; Shen Y
    Mol Genet Genomic Med; 2019 Jan; 7(1):e00513. PubMed ID: 30565893
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Copy number variations in the genome of the Qatari population.
    Fakhro KA; Yousri NA; Rodriguez-Flores JL; Robay A; Staudt MR; Agosto-Perez F; Salit J; Malek JA; Suhre K; Jayyousi A; Zirie M; Stadler D; Mezey JG; Crystal RG
    BMC Genomics; 2015 Oct; 16():834. PubMed ID: 26490036
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CNV-RF Is a Random Forest-Based Copy Number Variation Detection Method Using Next-Generation Sequencing.
    Onsongo G; Baughn LB; Bower M; Henzler C; Schomaker M; Silverstein KA; Thyagarajan B
    J Mol Diagn; 2016 Nov; 18(6):872-881. PubMed ID: 27597741
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SM-RCNV: a statistical method to detect recurrent copy number variations in sequenced samples.
    Li Y; Yuan X; Zhang J; Yang L; Bai J; Jiang S
    Genes Genomics; 2019 May; 41(5):529-536. PubMed ID: 30779024
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CNV-CH: A Convex Hull Based Segmentation Approach to Detect Copy Number Variations (CNV) Using Next-Generation Sequencing Data.
    Sinha R; Samaddar S; De RK
    PLoS One; 2015; 10(8):e0135895. PubMed ID: 26291322
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Detection of Significant Copy Number Variations From Multiple Samples in Next-Generation Sequencing Data.
    Yuan X; Zhang J; Yang L; Bai J; Fan P
    IEEE Trans Nanobioscience; 2018 Mar; 17(1):12-20. PubMed ID: 29570071
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CONY: A Bayesian procedure for detecting copy number variations from sequencing read depths.
    Wei YC; Huang GH
    Sci Rep; 2020 Jun; 10(1):10493. PubMed ID: 32591545
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An integrated approach for copy number variation discovery in parent-offspring trios.
    Liu Y; Wu X; Wang Y
    Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34151932
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Shape-based retrieval of CNV regions in read coverage data.
    Hong S; Yoon J; Hong D; Lee U; Kim B; Park S
    Int J Data Min Bioinform; 2014; 9(3):254-76. PubMed ID: 25163168
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.