192 related articles for article (PubMed ID: 29222161)
1. Detection of Proteome Diversity Resulted from Alternative Splicing is Limited by Trypsin Cleavage Specificity.
Wang X; Codreanu SG; Wen B; Li K; Chambers MC; Liebler DC; Zhang B
Mol Cell Proteomics; 2018 Mar; 17(3):422-430. PubMed ID: 29222161
[TBL] [Abstract][Full Text] [Related]
2. Proteomics beyond trypsin.
Tsiatsiani L; Heck AJ
FEBS J; 2015 Jul; 282(14):2612-26. PubMed ID: 25823410
[TBL] [Abstract][Full Text] [Related]
3. Six alternative proteases for mass spectrometry-based proteomics beyond trypsin.
Giansanti P; Tsiatsiani L; Low TY; Heck AJ
Nat Protoc; 2016 May; 11(5):993-1006. PubMed ID: 27123950
[TBL] [Abstract][Full Text] [Related]
4. Evaluation of the possible proteomic application of trypsin from Streptomyces griseus.
Stosová T; Sebela M; Rehulka P; Sedo O; Havlis J; Zdráhal Z
Anal Biochem; 2008 May; 376(1):94-102. PubMed ID: 18261455
[TBL] [Abstract][Full Text] [Related]
5.
Choong WK; Chen CT; Wang JH; Sung TY
J Proteome Res; 2019 Dec; 18(12):4124-4132. PubMed ID: 31429573
[TBL] [Abstract][Full Text] [Related]
6. Identification of novel alternative splicing biomarkers for breast cancer with LC/MS/MS and RNA-Seq.
Zhang F; Deng CK; Wang M; Deng B; Barber R; Huang G
BMC Bioinformatics; 2020 Dec; 21(Suppl 9):541. PubMed ID: 33272210
[TBL] [Abstract][Full Text] [Related]
7. Lysine Propionylation To Boost Sequence Coverage and Enable a "Silent SILAC" Strategy for Relative Protein Quantification.
Schräder CU; Moore S; Goodarzi AA; Schriemer DC
Anal Chem; 2018 Aug; 90(15):9077-9084. PubMed ID: 29975514
[TBL] [Abstract][Full Text] [Related]
8. Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.
Chen R; Jiang X; Sun D; Han G; Wang F; Ye M; Wang L; Zou H
J Proteome Res; 2009 Feb; 8(2):651-61. PubMed ID: 19159218
[TBL] [Abstract][Full Text] [Related]
9. In Silico Peptide Repertoire of Human Olfactory Receptor Proteomes on High-Stringency Mass Spectrometry.
Adhikari S; Sharma S; Ahn SB; Baker MS
J Proteome Res; 2019 Dec; 18(12):4117-4123. PubMed ID: 31046287
[TBL] [Abstract][Full Text] [Related]
10. Identification of a novel protein isoform derived from cancer-related splicing variants using combined analysis of transcriptome and proteome.
Hatakeyama K; Ohshima K; Fukuda Y; Ogura S; Terashima M; Yamaguchi K; Mochizuki T
Proteomics; 2011 Jun; 11(11):2275-82. PubMed ID: 21548097
[TBL] [Abstract][Full Text] [Related]
11. Expanding proteome coverage with orthogonal-specificity α-lytic proteases.
Meyer JG; Kim S; Maltby DA; Ghassemian M; Bandeira N; Komives EA
Mol Cell Proteomics; 2014 Mar; 13(3):823-35. PubMed ID: 24425750
[TBL] [Abstract][Full Text] [Related]
12. ProAlanase is an Effective Alternative to Trypsin for Proteomics Applications and Disulfide Bond Mapping.
Samodova D; Hosfield CM; Cramer CN; Giuli MV; Cappellini E; Franciosa G; Rosenblatt MM; Kelstrup CD; Olsen JV
Mol Cell Proteomics; 2020 Dec; 19(12):2139-2157. PubMed ID: 33020190
[TBL] [Abstract][Full Text] [Related]
13. From volcanoes to the bench: Advantages of novel hyperthermoacidic archaeal proteases for proteomics workflows.
McCabe MC; Gejji V; Barnebey A; Siuzdak G; Hoang LT; Pham T; Larson KY; Saviola AJ; Yannone SM; Hansen KC
J Proteomics; 2023 Oct; 289():104992. PubMed ID: 37634627
[TBL] [Abstract][Full Text] [Related]
14. Global detection of human variants and isoforms by deep proteome sequencing.
Sinitcyn P; Richards AL; Weatheritt RJ; Brademan DR; Marx H; Shishkova E; Meyer JG; Hebert AS; Westphall MS; Blencowe BJ; Cox J; Coon JJ
Nat Biotechnol; 2023 Dec; 41(12):1776-1786. PubMed ID: 36959352
[TBL] [Abstract][Full Text] [Related]
15. Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level.
Abascal F; Ezkurdia I; Rodriguez-Rivas J; Rodriguez JM; del Pozo A; Vázquez J; Valencia A; Tress ML
PLoS Comput Biol; 2015 Jun; 11(6):e1004325. PubMed ID: 26061177
[TBL] [Abstract][Full Text] [Related]
16. Protease specificity profiling by tandem mass spectrometry using proteome-derived peptide libraries.
Schilling O; auf dem Keller U; Overall CM
Methods Mol Biol; 2011; 753():257-72. PubMed ID: 21604128
[TBL] [Abstract][Full Text] [Related]
17. Increasing the Overall Proteome Coverage by Combining Protein Digestion by Tryp-N and Trypsin.
Hawksworth JI; Denolf L; Timmerman E; Gevaert K
Methods Mol Biol; 2023; 2718():1-10. PubMed ID: 37665451
[TBL] [Abstract][Full Text] [Related]
18. ArgC-Like Digestion: Complementary or Alternative to Tryptic Digestion?
Golghalyani V; Neupärtl M; Wittig I; Bahr U; Karas M
J Proteome Res; 2017 Feb; 16(2):978-987. PubMed ID: 28051317
[TBL] [Abstract][Full Text] [Related]
19. Applying multiple proteases to direct digestion of hundred-scale cell samples for proteome analysis.
Chen Q; Yan G; Zhang X
Rapid Commun Mass Spectrom; 2015 Aug; 29(15):1389-94. PubMed ID: 26147478
[TBL] [Abstract][Full Text] [Related]
20. Alternative Splicing May Not Be the Key to Proteome Complexity.
Tress ML; Abascal F; Valencia A
Trends Biochem Sci; 2017 Feb; 42(2):98-110. PubMed ID: 27712956
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
