These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

403 related articles for article (PubMed ID: 29228191)

  • 41. LVQ-KNN: Composition-based DNA/RNA binning of short nucleotide sequences utilizing a prototype-based k-nearest neighbor approach.
    Belka A; Fischer M; Pohlmann A; Beer M; Höper D
    Virus Res; 2018 Oct; 258():55-63. PubMed ID: 30291874
    [TBL] [Abstract][Full Text] [Related]  

  • 42. MetaMIS: a metagenomic microbial interaction simulator based on microbial community profiles.
    Shaw GT; Pao YY; Wang D
    BMC Bioinformatics; 2016 Nov; 17(1):488. PubMed ID: 27887570
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Assessment of Common and Emerging Bioinformatics Pipelines for Targeted Metagenomics.
    Siegwald L; Touzet H; Lemoine Y; Hot D; Audebert C; Caboche S
    PLoS One; 2017; 12(1):e0169563. PubMed ID: 28052134
    [TBL] [Abstract][Full Text] [Related]  

  • 44. VSEARCH: a versatile open source tool for metagenomics.
    Rognes T; Flouri T; Nichols B; Quince C; Mahé F
    PeerJ; 2016; 4():e2584. PubMed ID: 27781170
    [TBL] [Abstract][Full Text] [Related]  

  • 45. SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data.
    Dufresne Y; Lejzerowicz F; Perret-Gentil LA; Pawlowski J; Cordier T
    BMC Bioinformatics; 2019 Feb; 20(1):88. PubMed ID: 30782112
    [TBL] [Abstract][Full Text] [Related]  

  • 46. TreeSAPP: the Tree-based Sensitive and Accurate Phylogenetic Profiler.
    Morgan-Lang C; McLaughlin R; Armstrong Z; Zhang G; Chan K; Hallam SJ
    Bioinformatics; 2020 Sep; 36(18):4706-4713. PubMed ID: 32637989
    [TBL] [Abstract][Full Text] [Related]  

  • 47. MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies.
    Norling M; Karlsson-Lindsjö OE; Gourlé H; Bongcam-Rudloff E; Hayer J
    PLoS One; 2016; 11(8):e0160334. PubMed ID: 27479078
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Visual Omics Explorer (VOE): a cross-platform portal for interactive data visualization.
    Kim B; Ali T; Hosmer S; Krampis K
    Bioinformatics; 2016 Jul; 32(13):2050-2. PubMed ID: 27153572
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Galaxy Helm chart: a standardized method for deploying production Galaxy servers.
    Goonasekera N; Mahmoud A; Suderman K; Afgan E
    Bioinformatics; 2024 Aug; 40(8):. PubMed ID: 39107873
    [TBL] [Abstract][Full Text] [Related]  

  • 50. myGenomeBrowser: building and sharing your own genome browser.
    Carrere S; Gouzy J
    Bioinformatics; 2017 Apr; 33(8):1255-1257. PubMed ID: 28011789
    [TBL] [Abstract][Full Text] [Related]  

  • 51. CLUSTERnGO: a user-defined modelling platform for two-stage clustering of time-series data.
    Fidaner IB; Cankorur-Cetinkaya A; Dikicioglu D; Kirdar B; Cemgil AT; Oliver SG
    Bioinformatics; 2016 Feb; 32(3):388-97. PubMed ID: 26411869
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Large-scale machine learning for metagenomics sequence classification.
    Vervier K; Mahé P; Tournoud M; Veyrieras JB; Vert JP
    Bioinformatics; 2016 Apr; 32(7):1023-32. PubMed ID: 26589281
    [TBL] [Abstract][Full Text] [Related]  

  • 53. MetaSpark: a spark-based distributed processing tool to recruit metagenomic reads to reference genomes.
    Zhou W; Li R; Yuan S; Liu C; Yao S; Luo J; Niu B
    Bioinformatics; 2017 Apr; 33(7):1090-1092. PubMed ID: 28065898
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Seed: a user-friendly tool for exploring and visualizing microbial community data.
    Beck D; Dennis C; Foster JA
    Bioinformatics; 2015 Feb; 31(4):602-3. PubMed ID: 25332377
    [TBL] [Abstract][Full Text] [Related]  

  • 55. An omnibus test for differential distribution analysis of microbiome sequencing data.
    Chen J; King E; Deek R; Wei Z; Yu Y; Grill D; Ballman K; Stegle O
    Bioinformatics; 2018 Feb; 34(4):643-651. PubMed ID: 29040451
    [TBL] [Abstract][Full Text] [Related]  

  • 56. M&Ms: a versatile software for building microbial mock communities.
    García-García N; Tamames J; Puente-Sánchez F
    Bioinformatics; 2022 Mar; 38(7):2057-2059. PubMed ID: 35022654
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Biomartr: genomic data retrieval with R.
    Drost HG; Paszkowski J
    Bioinformatics; 2017 Apr; 33(8):1216-1217. PubMed ID: 28110292
    [TBL] [Abstract][Full Text] [Related]  

  • 58. AmpliCI: a high-resolution model-based approach for denoising Illumina amplicon data.
    Peng X; Dorman KS
    Bioinformatics; 2021 Jan; 36(21):5151-5158. PubMed ID: 32697845
    [TBL] [Abstract][Full Text] [Related]  

  • 59. The Amordad database engine for metagenomics.
    Behnam E; Smith AD
    Bioinformatics; 2014 Oct; 30(20):2949-55. PubMed ID: 24974201
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Application of a Database-Independent Approach To Assess the Quality of Operational Taxonomic Unit Picking Methods.
    Schloss PD
    mSystems; 2016; 1(2):. PubMed ID: 27832214
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 21.