268 related articles for article (PubMed ID: 29277867)
1. A Practical Guide for Comparative Genomics of Mobile Genetic Elements in Prokaryotic Genomes.
Oliveira Alvarenga D; Moreira LM; Chandler M; Varani AM
Methods Mol Biol; 2018; 1704():213-242. PubMed ID: 29277867
[TBL] [Abstract][Full Text] [Related]
2. Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5.
Mavrodi DV; Loper JE; Paulsen IT; Thomashow LS
BMC Microbiol; 2009 Jan; 9():8. PubMed ID: 19144133
[TBL] [Abstract][Full Text] [Related]
3. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.
Thakur S; Guttman DS
BMC Bioinformatics; 2016 Jun; 17(1):260. PubMed ID: 27363390
[TBL] [Abstract][Full Text] [Related]
4. Prokaryote genome fluidity: toward a system approach of the mobilome.
Toussaint A; Chandler M
Methods Mol Biol; 2012; 804():57-80. PubMed ID: 22144148
[TBL] [Abstract][Full Text] [Related]
5. Evolution and Diversity of the Antimicrobial Resistance Associated Mobilome in
Huang J; Ma J; Shang K; Hu X; Liang Y; Li D; Wu Z; Dai L; Chen L; Wang L
Front Cell Infect Microbiol; 2016; 6():118. PubMed ID: 27774436
[No Abstract] [Full Text] [Related]
6. Improving prokaryotic transposable elements identification using a combination of de novo and profile HMM methods.
Kamoun C; Payen T; Hua-Van A; Filée J
BMC Genomics; 2013 Oct; 14():700. PubMed ID: 24118975
[TBL] [Abstract][Full Text] [Related]
7. Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.
Binnewies TT; Motro Y; Hallin PF; Lund O; Dunn D; La T; Hampson DJ; Bellgard M; Wassenaar TM; Ussery DW
Funct Integr Genomics; 2006 Jul; 6(3):165-85. PubMed ID: 16773396
[TBL] [Abstract][Full Text] [Related]
8. Annotation and Comparative Genomics of Prokaryotic Transposable Elements.
Ross K; Zerillo MM; Chandler M; Varani AM
Methods Mol Biol; 2024; 2802():189-213. PubMed ID: 38819561
[TBL] [Abstract][Full Text] [Related]
9. ACLAME: a CLAssification of Mobile genetic Elements.
Leplae R; Hebrant A; Wodak SJ; Toussaint A
Nucleic Acids Res; 2004 Jan; 32(Database issue):D45-9. PubMed ID: 14681355
[TBL] [Abstract][Full Text] [Related]
10. ISQuest: finding insertion sequences in prokaryotic sequence fragment data.
Biswas A; Gauthier DT; Ranjan D; Zubair M
Bioinformatics; 2015 Nov; 31(21):3406-12. PubMed ID: 26116929
[TBL] [Abstract][Full Text] [Related]
11. Protein-Coding Gene Families in Prokaryote Genome Comparisons.
Carhuaricra-Huaman D; Setubal JC
Methods Mol Biol; 2024; 2802():33-55. PubMed ID: 38819555
[TBL] [Abstract][Full Text] [Related]
12. Divergence of mobile genetic elements involved in the distribution of xenobiotic-catabolic capacity.
Nojiri H; Shintani M; Omori T
Appl Microbiol Biotechnol; 2004 Apr; 64(2):154-74. PubMed ID: 14689248
[TBL] [Abstract][Full Text] [Related]
13. Mobile genetic elements: the agents of open source evolution.
Frost LS; Leplae R; Summers AO; Toussaint A
Nat Rev Microbiol; 2005 Sep; 3(9):722-32. PubMed ID: 16138100
[TBL] [Abstract][Full Text] [Related]
14. The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences.
Touchon M; Cury J; Yoon EJ; Krizova L; Cerqueira GC; Murphy C; Feldgarden M; Wortman J; Clermont D; Lambert T; Grillot-Courvalin C; Nemec A; Courvalin P; Rocha EP
Genome Biol Evol; 2014 Oct; 6(10):2866-82. PubMed ID: 25313016
[TBL] [Abstract][Full Text] [Related]
15. Comparative Genomics in Drosophila.
Oti M; Pane A; Sammeth M
Methods Mol Biol; 2018; 1704():433-450. PubMed ID: 29277877
[TBL] [Abstract][Full Text] [Related]
16. Sequence analysis of tyrosine recombinases allows annotation of mobile genetic elements in prokaryotic genomes.
Smyshlyaev G; Bateman A; Barabas O
Mol Syst Biol; 2021 May; 17(5):e9880. PubMed ID: 34018328
[TBL] [Abstract][Full Text] [Related]
17. mobileOG-db: a Manually Curated Database of Protein Families Mediating the Life Cycle of Bacterial Mobile Genetic Elements.
Brown CL; Mullet J; Hindi F; Stoll JE; Gupta S; Choi M; Keenum I; Vikesland P; Pruden A; Zhang L
Appl Environ Microbiol; 2022 Sep; 88(18):e0099122. PubMed ID: 36036594
[TBL] [Abstract][Full Text] [Related]
18. A Bioinformatic Analysis of Integrative Mobile Genetic Elements Highlights Their Role in Bacterial Adaptation.
Durrant MG; Li MM; Siranosian BA; Montgomery SB; Bhatt AS
Cell Host Microbe; 2020 Jan; 27(1):140-153.e9. PubMed ID: 31862382
[TBL] [Abstract][Full Text] [Related]
19. A Comprehensive Curation Shows the Dynamic Evolutionary Patterns of Prokaryotic CRISPRs.
Mai G; Ge R; Sun G; Meng Q; Zhou F
Biomed Res Int; 2016; 2016():7237053. PubMed ID: 27195295
[TBL] [Abstract][Full Text] [Related]
20. Causes of insertion sequences abundance in prokaryotic genomes.
Touchon M; Rocha EP
Mol Biol Evol; 2007 Apr; 24(4):969-81. PubMed ID: 17251179
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]