132 related articles for article (PubMed ID: 29285933)
1. QM/MM and MM MD Simulations on the Pyrimidine-Specific Nucleoside Hydrolase: A Comprehensive Understanding of Enzymatic Hydrolysis of Uridine.
Fan F; Chen N; Wang Y; Wu R; Cao Z
J Phys Chem B; 2018 Jan; 122(3):1121-1131. PubMed ID: 29285933
[TBL] [Abstract][Full Text] [Related]
2. Structural explanation for the tunable substrate specificity of an E. coli nucleoside hydrolase: insights from molecular dynamics simulations.
Lenz SAP; Wetmore SD
J Comput Aided Mol Des; 2018 Dec; 32(12):1375-1388. PubMed ID: 30478756
[TBL] [Abstract][Full Text] [Related]
3. QM/MM molecular dynamics study of purine-specific nucleoside hydrolase.
Wu R; Gong W; Liu T; Zhang Y; Cao Z
J Phys Chem B; 2012 Feb; 116(6):1984-91. PubMed ID: 22257300
[TBL] [Abstract][Full Text] [Related]
4. Structural basis for substrate specificity in group I nucleoside hydrolases.
Iovane E; Giabbai B; Muzzolini L; Matafora V; Fornili A; Minici C; Giannese F; Degano M
Biochemistry; 2008 Apr; 47(15):4418-26. PubMed ID: 18361502
[TBL] [Abstract][Full Text] [Related]
5. Mechanistic Insights into the Rate-Limiting Step in Purine-Specific Nucleoside Hydrolase.
Chen N; Zhao Y; Lu J; Wu R; Cao Z
J Chem Theory Comput; 2015 Jul; 11(7):3180-8. PubMed ID: 26575755
[TBL] [Abstract][Full Text] [Related]
6. Pyrimidine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus--biochemical characterization and homology modeling.
Porcelli M; Concilio L; Peluso I; Marabotti A; Facchiano A; Cacciapuoti G
FEBS J; 2008 Apr; 275(8):1900-14. PubMed ID: 18355316
[TBL] [Abstract][Full Text] [Related]
7. Saccharomyces cerevisiae URH1 (encoding uridine-cytidine N-ribohydrolase): functional complementation by a nucleoside hydrolase from a protozoan parasite and by a mammalian uridine phosphorylase.
Mitterbauer R; Karl T; Adam G
Appl Environ Microbiol; 2002 Mar; 68(3):1336-43. PubMed ID: 11872485
[TBL] [Abstract][Full Text] [Related]
8. Structure and function of nucleoside hydrolases from Physcomitrella patens and maize catalyzing the hydrolysis of purine, pyrimidine, and cytokinin ribosides.
Kopecná M; Blaschke H; Kopecny D; Vigouroux A; Koncitíková R; Novák O; Kotland O; Strnad M; Moréra S; von Schwartzenberg K
Plant Physiol; 2013 Dec; 163(4):1568-83. PubMed ID: 24170203
[TBL] [Abstract][Full Text] [Related]
9. Three-dimensional structure of the inosine-uridine nucleoside N-ribohydrolase from Crithidia fasciculata.
Degano M; Gopaul DN; Scapin G; Schramm VL; Sacchettini JC
Biochemistry; 1996 May; 35(19):5971-81. PubMed ID: 8634238
[TBL] [Abstract][Full Text] [Related]
10. Computer Simulations Reveal Substrate Specificity of Glycosidic Bond Cleavage in Native and Mutant Human Purine Nucleoside Phosphorylase.
Isaksen GV; Hopmann KH; Åqvist J; Brandsdal BO
Biochemistry; 2016 Apr; 55(14):2153-62. PubMed ID: 26985580
[TBL] [Abstract][Full Text] [Related]
11. Structure and function of a novel purine specific nucleoside hydrolase from Trypanosoma vivax.
Versées W; Decanniere K; Pellé R; Depoorter J; Brosens E; Parkin DW; Steyaert J
J Mol Biol; 2001 Apr; 307(5):1363-79. PubMed ID: 11292348
[TBL] [Abstract][Full Text] [Related]
12. Hydrolytic cleavage of purine ribonucleosides in Aspergillus phoenicis.
Abdel-Fatah OM; Elsayed MA; Elshafei AM
J Basic Microbiol; 2003; 43(6):439-48. PubMed ID: 14625894
[TBL] [Abstract][Full Text] [Related]
13. The URH1 uridine ribohydrolase of Saccharomyces cerevisiae.
Kurtz JE; Exinger F; Erbs P; Jund R
Curr Genet; 2002 Jun; 41(3):132-41. PubMed ID: 12111094
[TBL] [Abstract][Full Text] [Related]
14. Computational study of IAG-nucleoside hydrolase: determination of the preferred ground state conformation and the role of active site residues.
Mazumder-Shivakumar D; Bruice TC
Biochemistry; 2005 May; 44(21):7805-17. PubMed ID: 15909995
[TBL] [Abstract][Full Text] [Related]
15. Characterization of inosine-uridine nucleoside hydrolase (RihC) from Escherichia coli.
Arivett B; Farone M; Masiragani R; Burden A; Judge S; Osinloye A; Minici C; Degano M; Robinson M; Kline P
Biochim Biophys Acta; 2014 Mar; 1844(3):656-62. PubMed ID: 24473221
[TBL] [Abstract][Full Text] [Related]
16. Elucidating the Enzymatic Mechanism of Dihydrocoumarin Degradation: Insight into the Functional Evolution of Methyl-Parathion Hydrolase from QM/MM and MM MD Simulations.
Fu Y; Yu J; Fan F; Wang B; Cao Z
J Phys Chem B; 2024 Jun; 128(23):5567-5575. PubMed ID: 38814729
[TBL] [Abstract][Full Text] [Related]
17. Purification and characterization of RihC, a xanthosine-inosine-uridine-adenosine-preferring hydrolase from Salmonella enterica serovar Typhimurium.
Hansen MR; Dandanell G
Biochim Biophys Acta; 2005 May; 1723(1-3):55-62. PubMed ID: 15784179
[TBL] [Abstract][Full Text] [Related]
18. Accurate description of nitrogenous base flexibility in classical molecular dynamics simulations of nucleotides bound to proteins.
Fornili A; Sironi M; Degano M
J Phys Chem B; 2007 Jun; 111(23):6297-302. PubMed ID: 17508739
[TBL] [Abstract][Full Text] [Related]
19. Enzymatic synthesis of 2'-O-methylribonucleosides with a nucleoside hydrolase family enzyme from Lactobacillus buchneri LBK78.
Mitsukawa Y; Hibi M; Matsutani N; Horinouchi N; Takahashi S; Ogawa J
J Biosci Bioeng; 2017 Jun; 123(6):659-664. PubMed ID: 28202305
[TBL] [Abstract][Full Text] [Related]
20. Biochemical characterization of recombinant nucleoside hydrolase from Mycobacterium tuberculosis H37Rv.
Wink PL; Sanchez Quitian ZA; Rosado LA; Rodrigues Vda S; Petersen GO; Lorenzini DM; Lipinski-Paes T; Saraiva Macedo Timmers LF; de Souza ON; Basso LA; Santos DS
Arch Biochem Biophys; 2013 Oct; 538(2):80-94. PubMed ID: 23988349
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
