360 related articles for article (PubMed ID: 29344693)
1. Triplet-Based Codon Organization Optimizes the Impact of Synonymous Mutation on Nucleic Acid Molecular Dynamics.
Babbitt GA; Coppola EE; Mortensen JS; Ekeren PX; Viola C; Goldblatt D; Hudson AO
J Mol Evol; 2018 Feb; 86(2):91-102. PubMed ID: 29344693
[TBL] [Abstract][Full Text] [Related]
2. Synonymous Codons: Choose Wisely for Expression.
Brule CE; Grayhack EJ
Trends Genet; 2017 Apr; 33(4):283-297. PubMed ID: 28292534
[TBL] [Abstract][Full Text] [Related]
3. Molecular Mechanisms and the Significance of Synonymous Mutations.
Oelschlaeger P
Biomolecules; 2024 Jan; 14(1):. PubMed ID: 38275761
[TBL] [Abstract][Full Text] [Related]
4. Evolution of the genetic triplet code via two types of doublet codons.
Wu HL; Bagby S; van den Elsen JM
J Mol Evol; 2005 Jul; 61(1):54-64. PubMed ID: 16059752
[TBL] [Abstract][Full Text] [Related]
5. Evolution of the genetic code: partial optimization of a random code for robustness to translation error in a rugged fitness landscape.
Novozhilov AS; Wolf YI; Koonin EV
Biol Direct; 2007 Oct; 2():24. PubMed ID: 17956616
[TBL] [Abstract][Full Text] [Related]
6. Codon-Resolution Analysis Reveals a Direct and Context-Dependent Impact of Individual Synonymous Mutations on mRNA Level.
Chen S; Li K; Cao W; Wang J; Zhao T; Huan Q; Yang YF; Wu S; Qian W
Mol Biol Evol; 2017 Nov; 34(11):2944-2958. PubMed ID: 28961875
[TBL] [Abstract][Full Text] [Related]
7. A binary representation of the genetic code.
Nemzer LR
Biosystems; 2017 May; 155():10-19. PubMed ID: 28300609
[TBL] [Abstract][Full Text] [Related]
8. A neutral origin for error minimization in the genetic code.
Massey SE
J Mol Evol; 2008 Nov; 67(5):510-6. PubMed ID: 18855039
[TBL] [Abstract][Full Text] [Related]
9. Evolution of the genetic code through progressive symmetry breaking.
Lenstra R
J Theor Biol; 2014 Apr; 347():95-108. PubMed ID: 24434741
[TBL] [Abstract][Full Text] [Related]
10. Synonymous codon bias and functional constraint on GC3-related DNA backbone dynamics in the prokaryotic nucleoid.
Babbitt GA; Alawad MA; Schulze KV; Hudson AO
Nucleic Acids Res; 2014; 42(17):10915-26. PubMed ID: 25200075
[TBL] [Abstract][Full Text] [Related]
11. The Yin and Yang of codon usage.
Komar AA
Hum Mol Genet; 2016 Oct; 25(R2):R77-R85. PubMed ID: 27354349
[TBL] [Abstract][Full Text] [Related]
12. The impact of including tRNA content on the optimality of the genetic code.
Goodarzi H; Najafabadi HS; Nejad HA; Torabi N
Bull Math Biol; 2005 Nov; 67(6):1355-68. PubMed ID: 16005951
[TBL] [Abstract][Full Text] [Related]
13. Decoding mechanisms by which silent codon changes influence protein biogenesis and function.
Bali V; Bebok Z
Int J Biochem Cell Biol; 2015 Jul; 64():58-74. PubMed ID: 25817479
[TBL] [Abstract][Full Text] [Related]
14. Adaptation of Borrelia burgdorferi to its natural hosts by synonymous codon and amino acid usage.
Ma XX; Ma P; Chang QY; Liu ZB; Zhang D; Zhou XK; Ma ZR; Cao X
J Basic Microbiol; 2018 May; 58(5):414-424. PubMed ID: 29534300
[TBL] [Abstract][Full Text] [Related]
15. Parsing the synonymous mutations in the maize genome: isoaccepting mutations are more advantageous in regions with codon co-occurrence bias.
Chu D; Wei L
BMC Plant Biol; 2019 Oct; 19(1):422. PubMed ID: 31610786
[TBL] [Abstract][Full Text] [Related]
16. The influence of codon context on genetic code translation.
Bossi L; Roth JR
Nature; 1980 Jul; 286(5769):123-7. PubMed ID: 7402305
[TBL] [Abstract][Full Text] [Related]
17. Codon size reduction as the origin of the triplet genetic code.
Baranov PV; Venin M; Provan G
PLoS One; 2009 May; 4(5):e5708. PubMed ID: 19479032
[TBL] [Abstract][Full Text] [Related]
18. Fitting the standard genetic code into its triplet table.
Yarus M
Proc Natl Acad Sci U S A; 2021 Sep; 118(36):. PubMed ID: 34462348
[TBL] [Abstract][Full Text] [Related]
19. Considerations in the Use of Codon Optimization for Recombinant Protein Expression.
Mauro VP; Chappell SA
Methods Mol Biol; 2018; 1850():275-288. PubMed ID: 30242693
[TBL] [Abstract][Full Text] [Related]
20. Emergent rules for codon choice elucidated by editing rare arginine codons in Escherichia coli.
Napolitano MG; Landon M; Gregg CJ; Lajoie MJ; Govindarajan L; Mosberg JA; Kuznetsov G; Goodman DB; Vargas-Rodriguez O; Isaacs FJ; Söll D; Church GM
Proc Natl Acad Sci U S A; 2016 Sep; 113(38):E5588-97. PubMed ID: 27601680
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
