BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

810 related articles for article (PubMed ID: 29373999)

  • 21. Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR.
    Lazarevic V; Gaïa N; Girard M; Schrenzel J
    BMC Microbiol; 2016 Apr; 16():73. PubMed ID: 27107811
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions.
    Maughan H; Wang PW; Diaz Caballero J; Fung P; Gong Y; Donaldson SL; Yuan L; Keshavjee S; Zhang Y; Yau YC; Waters VJ; Tullis DE; Hwang DM; Guttman DS
    PLoS One; 2012; 7(10):e45791. PubMed ID: 23056217
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Refinement of 16S rRNA gene analysis for low biomass biospecimens.
    Villette R; Autaa G; Hind S; Holm JB; Moreno-Sabater A; Larsen M
    Sci Rep; 2021 May; 11(1):10741. PubMed ID: 34031485
    [TBL] [Abstract][Full Text] [Related]  

  • 24. High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution.
    Callahan BJ; Wong J; Heiner C; Oh S; Theriot CM; Gulati AS; McGill SK; Dougherty MK
    Nucleic Acids Res; 2019 Oct; 47(18):e103. PubMed ID: 31269198
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Investigation of bacterial and archaeal communities: novel protocols using modern sequencing by Illumina MiSeq and traditional DGGE-cloning.
    Kraková L; Šoltys K; Budiš J; Grivalský T; Ďuriš F; Pangallo D; Szemes T
    Extremophiles; 2016 Sep; 20(5):795-808. PubMed ID: 27338271
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene.
    Allen HK; Bayles DO; Looft T; Trachsel J; Bass BE; Alt DP; Bearson SM; Nicholson T; Casey TA
    BMC Res Notes; 2016 Aug; 9():380. PubMed ID: 27485508
    [TBL] [Abstract][Full Text] [Related]  

  • 27. A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform.
    de Muinck EJ; Trosvik P; Gilfillan GD; Hov JR; Sundaram AYM
    Microbiome; 2017 Jul; 5(1):68. PubMed ID: 28683838
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
    Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
    BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Short-read assembly of full-length 16S amplicons reveals bacterial diversity in subsurface sediments.
    Miller CS; Handley KM; Wrighton KC; Frischkorn KR; Thomas BC; Banfield JF
    PLoS One; 2013; 8(2):e56018. PubMed ID: 23405248
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.
    Benítez-Páez A; Portune KJ; Sanz Y
    Gigascience; 2016; 5():4. PubMed ID: 26823973
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Choice of 16S Ribosomal RNA Primers Impacts Male Urinary Microbiota Profiling.
    Heidrich V; Inoue LT; Asprino PF; Bettoni F; Mariotti ACH; Bastos DA; Jardim DLF; Arap MA; Camargo AA
    Front Cell Infect Microbiol; 2022; 12():862338. PubMed ID: 35531325
    [TBL] [Abstract][Full Text] [Related]  

  • 32. ddPCR allows 16S rRNA gene amplicon sequencing of very small DNA amounts from low-biomass samples.
    Abellan-Schneyder I; Schusser AJ; Neuhaus K
    BMC Microbiol; 2021 Dec; 21(1):349. PubMed ID: 34922460
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Real-time quantitative broad-range PCR assay for detection of the 16S rRNA gene followed by sequencing for species identification.
    Zucol F; Ammann RA; Berger C; Aebi C; Altwegg M; Niggli FK; Nadal D
    J Clin Microbiol; 2006 Aug; 44(8):2750-9. PubMed ID: 16891488
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets.
    F Escapa I; Huang Y; Chen T; Lin M; Kokaras A; Dewhirst FE; Lemon KP
    Microbiome; 2020 May; 8(1):65. PubMed ID: 32414415
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis.
    Johnson JS; Spakowicz DJ; Hong BY; Petersen LM; Demkowicz P; Chen L; Leopold SR; Hanson BM; Agresta HO; Gerstein M; Sodergren E; Weinstock GM
    Nat Commun; 2019 Nov; 10(1):5029. PubMed ID: 31695033
    [TBL] [Abstract][Full Text] [Related]  

  • 36. High-Resolution Differentiation of Enteric Bacteria in Premature Infant Fecal Microbiomes Using a Novel rRNA Amplicon.
    Graf J; Ledala N; Caimano MJ; Jackson E; Gratalo D; Fasulo D; Driscoll MD; Coleman S; Matson AP
    mBio; 2021 Feb; 12(1):. PubMed ID: 33593974
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Development of a custom 16S rRNA gene library for the identification and molecular subtyping of Salmonella enterica.
    Hellberg RS; Haney CJ; Shen Y; Cheng CM; Williams-Hill DM; Martin WB
    J Microbiol Methods; 2012 Dec; 91(3):448-58. PubMed ID: 23022443
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Optimizing 16S rRNA gene profile analysis from low biomass nasopharyngeal and induced sputum specimens.
    Claassen-Weitz S; Gardner-Lubbe S; Mwaikono KS; du Toit E; Zar HJ; Nicol MP
    BMC Microbiol; 2020 May; 20(1):113. PubMed ID: 32397992
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Genome-Based Targeted Sequencing as a Reproducible Microbial Community Profiling Assay.
    Benjamino J; Leopold B; Phillips D; Adams MD
    mSphere; 2021 Apr; 6(2):. PubMed ID: 33827913
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Long PCR-RFLP of 16S-ITS-23S rRNA genes: a high-resolution molecular tool for bacterial genotyping.
    Zeng YH; Koblížek M; Li YX; Liu YP; Feng FY; Ji JD; Jian JC; Wu ZH
    J Appl Microbiol; 2013 Feb; 114(2):433-47. PubMed ID: 23126629
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 41.