538 related articles for article (PubMed ID: 29379090)
1. GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data.
Araujo FA; Barh D; Silva A; Guimarães L; Ramos RTJ
Sci Rep; 2018 Jan; 8(1):1794. PubMed ID: 29379090
[TBL] [Abstract][Full Text] [Related]
2. DoriTool: A Bioinformatics Integrative Tool for Post-Association Functional Annotation.
Martín-Antoniano I; Alonso L; Madrid M; López de Maturana E; Malats N
Public Health Genomics; 2017; 20(2):126-135. PubMed ID: 28700989
[TBL] [Abstract][Full Text] [Related]
3. GRYFUN: a web application for GO term annotation visualization and analysis in protein sets.
Bastos HP; Sousa L; Clarke LA; Couto FM
PLoS One; 2015; 10(3):e0119631. PubMed ID: 25794277
[TBL] [Abstract][Full Text] [Related]
4. DaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures.
Mazandu GK; Mulder NJ
BMC Bioinformatics; 2013 Sep; 14():284. PubMed ID: 24067102
[TBL] [Abstract][Full Text] [Related]
5. PANNZER2: a rapid functional annotation web server.
Törönen P; Medlar A; Holm L
Nucleic Acids Res; 2018 Jul; 46(W1):W84-W88. PubMed ID: 29741643
[TBL] [Abstract][Full Text] [Related]
6. Get GO! Retrieving GO Data Using AmiGO, QuickGO, API, Files, and Tools.
Munoz-Torres M; Carbon S
Methods Mol Biol; 2017; 1446():149-160. PubMed ID: 27812941
[TBL] [Abstract][Full Text] [Related]
7. A-DaGO-Fun: an adaptable Gene Ontology semantic similarity-based functional analysis tool.
Mazandu GK; Chimusa ER; Mbiyavanga M; Mulder NJ
Bioinformatics; 2016 Feb; 32(3):477-9. PubMed ID: 26476781
[TBL] [Abstract][Full Text] [Related]
8. Blast2Fish: a reference-based annotation web tool for transcriptome analysis of non-model teleost fish.
Tso CH; Wu JL; Lu MW
BMC Bioinformatics; 2020 May; 21(1):174. PubMed ID: 32366294
[TBL] [Abstract][Full Text] [Related]
9. GeneTools--application for functional annotation and statistical hypothesis testing.
Beisvag V; Jünge FK; Bergum H; Jølsum L; Lydersen S; Günther CC; Ramampiaro H; Langaas M; Sandvik AK; Laegreid A
BMC Bioinformatics; 2006 Oct; 7():470. PubMed ID: 17062145
[TBL] [Abstract][Full Text] [Related]
10. MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes.
Ruiz-Perez CA; Conrad RE; Konstantinidis KT
BMC Bioinformatics; 2021 Jan; 22(1):11. PubMed ID: 33407081
[TBL] [Abstract][Full Text] [Related]
11. Visual annotation display (VLAD): a tool for finding functional themes in lists of genes.
Richardson JE; Bult CJ
Mamm Genome; 2015 Oct; 26(9-10):567-73. PubMed ID: 26047590
[TBL] [Abstract][Full Text] [Related]
12. Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data.
Lohse M; Nagel A; Herter T; May P; Schroda M; Zrenner R; Tohge T; Fernie AR; Stitt M; Usadel B
Plant Cell Environ; 2014 May; 37(5):1250-8. PubMed ID: 24237261
[TBL] [Abstract][Full Text] [Related]
13. ParsEval: parallel comparison and analysis of gene structure annotations.
Standage DS; Brendel VP
BMC Bioinformatics; 2012 Aug; 13():187. PubMed ID: 22852583
[TBL] [Abstract][Full Text] [Related]
14. IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data.
Baez-Ortega A; Lorenzo-Diaz F; Hernandez M; Gonzalez-Vila CI; Roda-Garcia JL; Colebrook M; Flores C
Bioinformatics; 2015 Sep; 31(17):2870-3. PubMed ID: 25953799
[TBL] [Abstract][Full Text] [Related]
15. WEGO 2.0: a web tool for analyzing and plotting GO annotations, 2018 update.
Ye J; Zhang Y; Cui H; Liu J; Wu Y; Cheng Y; Xu H; Huang X; Li S; Zhou A; Zhang X; Bolund L; Chen Q; Wang J; Yang H; Fang L; Shi C
Nucleic Acids Res; 2018 Jul; 46(W1):W71-W75. PubMed ID: 29788377
[TBL] [Abstract][Full Text] [Related]
16. FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments.
Scala G; Serra A; Marwah VS; Saarimäki LA; Greco D
BMC Bioinformatics; 2019 Feb; 20(1):79. PubMed ID: 30767762
[TBL] [Abstract][Full Text] [Related]
17. Transcriptator: An Automated Computational Pipeline to Annotate Assembled Reads and Identify Non Coding RNA.
Tripathi KP; Evangelista D; Zuccaro A; Guarracino MR
PLoS One; 2015; 10(11):e0140268. PubMed ID: 26581084
[TBL] [Abstract][Full Text] [Related]
18. Expansion of the Gene Ontology knowledgebase and resources.
The Gene Ontology Consortium
Nucleic Acids Res; 2017 Jan; 45(D1):D331-D338. PubMed ID: 27899567
[TBL] [Abstract][Full Text] [Related]
19. Extracting Cross-Ontology Weighted Association Rules from Gene Ontology Annotations.
Agapito G; Milano M; Guzzi PH; Cannataro M
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(2):197-208. PubMed ID: 27045823
[TBL] [Abstract][Full Text] [Related]
20. Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data.
Lopez D; Casero D; Cokus SJ; Merchant SS; Pellegrini M
BMC Bioinformatics; 2011 Jul; 12():282. PubMed ID: 21749710
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
