136 related articles for article (PubMed ID: 29387080)
1. Method for the Identification of Taxon-Specific
Raime K; Remm M
Front Plant Sci; 2018; 9():6. PubMed ID: 29387080
[TBL] [Abstract][Full Text] [Related]
2. Method for the Identification of Plant DNA in Food Using Alignment-Free Analysis of Sequencing Reads: A Case Study on Lupin.
Raime K; Krjutškov K; Remm M
Front Plant Sci; 2020; 11():646. PubMed ID: 32528502
[TBL] [Abstract][Full Text] [Related]
3. Accurate identification of taxon-specific molecular markers in plants based on DNA signature sequence.
Hua Z; Jiang C; Song S; Tian D; Chen Z; Jin Y; Zhao Y; Zhou J; Zhang Z; Huang L; Yuan Y
Mol Ecol Resour; 2023 Jan; 23(1):106-117. PubMed ID: 35951477
[TBL] [Abstract][Full Text] [Related]
4.
Izan S; Esselink D; Visser RGF; Smulders MJM; Borm T
Front Plant Sci; 2017; 8():1271. PubMed ID: 28824658
[TBL] [Abstract][Full Text] [Related]
5. SRIdent: A novel pipeline for real-time identification of species from high-throughput sequencing reads in Metagenomics and clinical diagnostic assays.
Karimi R; Hajdu A
Annu Int Conf IEEE Eng Med Biol Soc; 2015; 2015():6481-4. PubMed ID: 26737777
[TBL] [Abstract][Full Text] [Related]
6. A comparison of the low temperature transcriptomes of two tomato genotypes that differ in freezing tolerance: Solanum lycopersicum and Solanum habrochaites.
Chen H; Chen X; Chen D; Li J; Zhang Y; Wang A
BMC Plant Biol; 2015 Jun; 15():132. PubMed ID: 26048292
[TBL] [Abstract][Full Text] [Related]
7. Reference-free Association Mapping from Sequencing Reads Using k-mers.
Mehrab Z; Mobin J; Tahmid IA; Pachter L; Rahman A
Bio Protoc; 2020 Nov; 10(21):e3815. PubMed ID: 33659468
[TBL] [Abstract][Full Text] [Related]
8. Phylogenomics of tomato chloroplasts using assembly and alignment-free method.
Amado Cattáneo RM; Diambra L; McCarthy AN
Mitochondrial DNA A DNA Mapp Seq Anal; 2018 Oct; 29(7):1128-1138. PubMed ID: 29338473
[TBL] [Abstract][Full Text] [Related]
9. Measuring the Invisible: The Sequences Causal of Genome Size Differences in Eyebrights (
Becher H; Sampson J; Twyford AD
Front Plant Sci; 2022; 13():818410. PubMed ID: 35968114
[TBL] [Abstract][Full Text] [Related]
10. A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes.
Kurtz S; Narechania A; Stein JC; Ware D
BMC Genomics; 2008 Oct; 9():517. PubMed ID: 18976482
[TBL] [Abstract][Full Text] [Related]
11. A chloroplast genomic strategy for designing taxon specific DNA mini-barcodes: a case study on ginsengs.
Dong W; Liu H; Xu C; Zuo Y; Chen Z; Zhou S
BMC Genet; 2014 Dec; 15():138. PubMed ID: 25526752
[TBL] [Abstract][Full Text] [Related]
12. Whole genome sequence data of 516 F
Lee TG
Data Brief; 2024 Aug; 55():110567. PubMed ID: 38952950
[TBL] [Abstract][Full Text] [Related]
13. Estimating the total genome length of a metagenomic sample using k-mers.
Hua K; Zhang X
BMC Genomics; 2019 Apr; 20(Suppl 2):183. PubMed ID: 30967110
[TBL] [Abstract][Full Text] [Related]
14. Development of a set of PCR-based anchor markers encompassing the tomato genome and evaluation of their usefulness for genetics and breeding experiments.
Frary A; Xu Y; Liu J; Mitchell S; Tedeschi E; Tanksley S
Theor Appl Genet; 2005 Jul; 111(2):291-312. PubMed ID: 15926074
[TBL] [Abstract][Full Text] [Related]
15. Predicting bacterial resistance from whole-genome sequences using k-mers and stability selection.
Mahé P; Tournoud M
BMC Bioinformatics; 2018 Oct; 19(1):383. PubMed ID: 30332990
[TBL] [Abstract][Full Text] [Related]
16. Plant DNA barcoding: from gene to genome.
Li X; Yang Y; Henry RJ; Rossetto M; Wang Y; Chen S
Biol Rev Camb Philos Soc; 2015 Feb; 90(1):157-66. PubMed ID: 24666563
[TBL] [Abstract][Full Text] [Related]
17. Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum lycopersicum and comparative analyses with other Solanaceae genomes.
Daniell H; Lee SB; Grevich J; Saski C; Quesada-Vargas T; Guda C; Tomkins J; Jansen RK
Theor Appl Genet; 2006 May; 112(8):1503-18. PubMed ID: 16575560
[TBL] [Abstract][Full Text] [Related]
18. K-mer-Based Motif Analysis in Insect Species across
Cserhati M; Xiao P; Guda C
Comput Math Methods Med; 2019; 2019():4259479. PubMed ID: 31827584
[TBL] [Abstract][Full Text] [Related]
19. LROD: An Overlap Detection Algorithm for Long Reads Based on
Luo J; Chen R; Zhang X; Wang Y; Luo H; Yan C; Huo Z
Front Genet; 2020; 11():632. PubMed ID: 32849762
[TBL] [Abstract][Full Text] [Related]
20. Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis.
Dubinkina VB; Ischenko DS; Ulyantsev VI; Tyakht AV; Alexeev DG
BMC Bioinformatics; 2016 Jan; 17():38. PubMed ID: 26774270
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
