These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

211 related articles for article (PubMed ID: 29408296)

  • 1. GNC-app: A new Cytoscape app to rate gene networks biological coherence using gene-gene indirect relationships.
    Díaz-Montaña JJ; Gómez-Vela F; Díaz-Díaz N
    Biosystems; 2018 Apr; 166():61-65. PubMed ID: 29408296
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Development and use of a Cytoscape app for GRNCOP2.
    Díaz-Montaña JJ; Díaz-Díaz N; Barranco CD; Ponzoni I
    Comput Methods Programs Biomed; 2019 Aug; 177():211-218. PubMed ID: 31319950
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The Cyni framework for network inference in Cytoscape.
    Guitart-Pla O; Kustagi M; Rügheimer F; Califano A; Schwikowski B
    Bioinformatics; 2015 May; 31(9):1499-501. PubMed ID: 25527096
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A Cytoscape app for motif enumeration with ISMAGS.
    Van Parys T; Melckenbeeck I; Houbraken M; Audenaert P; Colle D; Pickavet M; Demeester P; Van de Peer Y
    Bioinformatics; 2017 Feb; 33(3):461-463. PubMed ID: 28158465
    [TBL] [Abstract][Full Text] [Related]  

  • 5. CytoGEDEVO-global alignment of biological networks with Cytoscape.
    Malek M; Ibragimov R; Albrecht M; Baumbach J
    Bioinformatics; 2016 Apr; 32(8):1259-61. PubMed ID: 26669930
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CytoASP: a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks.
    Kittas A; Barozet A; Sereshti J; Grabe N; Tsoka S
    BMC Syst Biol; 2015 Jul; 9():34. PubMed ID: 26163265
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Orthoscape: a cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles.
    Mustafin ZS; Lashin SA; Matushkin YG; Gunbin KV; Afonnikov DA
    BMC Bioinformatics; 2017 Jan; 18(Suppl 1):1427. PubMed ID: 28466792
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Visualize omics data on networks with Omics Visualizer, a Cytoscape App.
    Legeay M; Doncheva NT; Morris JH; Jensen LJ
    F1000Res; 2020; 9():157. PubMed ID: 32399202
    [TBL] [Abstract][Full Text] [Related]  

  • 9. CyNetworkBMA: a Cytoscape app for inferring gene regulatory networks.
    Fronczuk M; Raftery AE; Yeung KY
    Source Code Biol Med; 2015; 10():11. PubMed ID: 26566394
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cytoscape app store.
    Lotia S; Montojo J; Dong Y; Bader GD; Pico AR
    Bioinformatics; 2013 May; 29(10):1350-1. PubMed ID: 23595664
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CytoCtrlAnalyser: a Cytoscape app for biomolecular network controllability analysis.
    Wu L; Li M; Wang J; Wu FX
    Bioinformatics; 2018 Apr; 34(8):1428-1430. PubMed ID: 29186337
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data.
    Doncheva NT; Morris JH; Gorodkin J; Jensen LJ
    J Proteome Res; 2019 Feb; 18(2):623-632. PubMed ID: 30450911
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MORO: a Cytoscape app for relationship analysis between modularity and robustness in large-scale biological networks.
    Truong CD; Tran TD; Kwon YK
    BMC Syst Biol; 2016 Dec; 10(Suppl 4):122. PubMed ID: 28155725
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Automated exploration of gene ontology term and pathway networks with ClueGO-REST.
    Mlecnik B; Galon J; Bindea G
    Bioinformatics; 2019 Oct; 35(19):3864-3866. PubMed ID: 30847467
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DyNet: visualization and analysis of dynamic molecular interaction networks.
    Goenawan IH; Bryan K; Lynn DJ
    Bioinformatics; 2016 Sep; 32(17):2713-5. PubMed ID: 27153624
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PTMOracle: A Cytoscape App for Covisualizing and Coanalyzing Post-Translational Modifications in Protein Interaction Networks.
    Tay AP; Pang CNI; Winter DL; Wilkins MR
    J Proteome Res; 2017 May; 16(5):1988-2003. PubMed ID: 28349685
    [TBL] [Abstract][Full Text] [Related]  

  • 17. NOA: a cytoscape plugin for network ontology analysis.
    Zhang C; Wang J; Hanspers K; Xu D; Chen L; Pico AR
    Bioinformatics; 2013 Aug; 29(16):2066-7. PubMed ID: 23749961
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CyTargetLinker app update: A flexible solution for network extension in Cytoscape.
    Kutmon M; Ehrhart F; Willighagen EL; Evelo CT; Coort SL
    F1000Res; 2018; 7():. PubMed ID: 31489175
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ReNE: a cytoscape plugin for regulatory network enhancement.
    Politano G; Benso A; Savino A; Di Carlo S
    PLoS One; 2014; 9(12):e115585. PubMed ID: 25541727
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DyNetViewer: a Cytoscape app for dynamic network construction, analysis and visualization.
    Li M; Yang J; Wu FX; Pan Y; Wang J
    Bioinformatics; 2018 May; 34(9):1597-1599. PubMed ID: 29293938
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.