171 related articles for article (PubMed ID: 29414701)
1. Soft Vibrational Modes Predict Breaking Events during Force-Induced Protein Unfolding.
Habibi M; Plotkin SS; Rottler J
Biophys J; 2018 Feb; 114(3):562-569. PubMed ID: 29414701
[TBL] [Abstract][Full Text] [Related]
2. The unfolding mechanism of monomeric mutant SOD1 by simulated force spectroscopy.
Habibi M; Rottler J; Plotkin SS
Biochim Biophys Acta Proteins Proteom; 2017 Nov; 1865(11 Pt B):1631-1642. PubMed ID: 28629863
[TBL] [Abstract][Full Text] [Related]
3. As Simple As Possible, but Not Simpler: Exploring the Fidelity of Coarse-Grained Protein Models for Simulated Force Spectroscopy.
Habibi M; Rottler J; Plotkin SS
PLoS Comput Biol; 2016 Nov; 12(11):e1005211. PubMed ID: 27898663
[TBL] [Abstract][Full Text] [Related]
4. TFE-induced local unfolding and fibrillation of SOD1: bridging the experiment and simulation studies.
Kumar V; Prakash A; Pandey P; Lynn AM; Hassan MI
Biochem J; 2018 May; 475(10):1701-1719. PubMed ID: 29686043
[TBL] [Abstract][Full Text] [Related]
5. Protein unfolding under force: crack propagation in a network.
de Graff AM; Shannon G; Farrell DW; Williams PM; Thorpe MF
Biophys J; 2011 Aug; 101(3):736-44. PubMed ID: 21806942
[TBL] [Abstract][Full Text] [Related]
6. Trajectory Taken by Dimeric Cu/Zn Superoxide Dismutase through the Protein Unfolding and Dissociation Landscape Is Modulated by Salt Bridge Formation.
McAlary L; Harrison JA; Aquilina JA; Fitzgerald SP; Kelso C; Benesch JLP; Yerbury JJ
Anal Chem; 2020 Jan; 92(2):1702-1711. PubMed ID: 31854977
[TBL] [Abstract][Full Text] [Related]
7. Loading-device effects on the protein-unfolding mechanisms using molecular-dynamic simulations.
Lee M; Choi H; Yoon G; Na S
J Mol Graph Model; 2018 May; 81():162-167. PubMed ID: 29554493
[TBL] [Abstract][Full Text] [Related]
8. Local structural unfolding at the edge-strands of beta sheets is the molecular basis for instability and aggregation of G85R and G93A mutants of superoxide dismutase 1.
Kumar Ghosh D; Nanaji Shrikondawar A; Ranjan A
J Biomol Struct Dyn; 2020 Feb; 38(3):647-659. PubMed ID: 30806161
[TBL] [Abstract][Full Text] [Related]
9. Early steps in thermal unfolding of superoxide dismutase 1 are similar to the conformational changes associated with the ALS-associated A4V mutation.
Schmidlin T; Ploeger K; Jonsson AL; Daggett V
Protein Eng Des Sel; 2013 Aug; 26(8):503-13. PubMed ID: 23784844
[TBL] [Abstract][Full Text] [Related]
10. Visualizing Protein Folding and Unfolding.
Ferina J; Daggett V
J Mol Biol; 2019 Apr; 431(8):1540-1564. PubMed ID: 30840846
[TBL] [Abstract][Full Text] [Related]
11. Single-molecule analysis of osmolyte-mediated nanomechanical unfolding behavior of a protein domain.
Bajaj M; Muddassir M; Choi B; Singh P; Park JB; Singh S; Yadav M; Kumar R; Eom K; Sharma D
Int J Biol Macromol; 2023 Dec; 253(Pt 3):126849. PubMed ID: 37717878
[TBL] [Abstract][Full Text] [Related]
12. S95C substitution in CuZn-SOD of Ipomoea carnea: impact on the structure, function and stability.
Mishra P; Satpati S; Baral SK; Dixit A; Sabat SC
Mol Biosyst; 2016 Oct; 12(10):3017-31. PubMed ID: 27444322
[TBL] [Abstract][Full Text] [Related]
13. Computer simulations of protein folding by targeted molecular dynamics.
Ferrara P; Apostolakis J; Caflisch A
Proteins; 2000 May; 39(3):252-60. PubMed ID: 10737947
[TBL] [Abstract][Full Text] [Related]
14. Local unfolding of Cu, Zn superoxide dismutase monomer determines the morphology of fibrillar aggregates.
Ding F; Furukawa Y; Nukina N; Dokholyan NV
J Mol Biol; 2012 Aug; 421(4-5):548-60. PubMed ID: 22210350
[TBL] [Abstract][Full Text] [Related]
15. Reconstruction of mechanical unfolding and refolding pathways of proteins with atomic force spectroscopy and computer simulations.
Li Q; Apostolidou D; Marszalek PE
Methods; 2022 Jan; 197():39-53. PubMed ID: 34020035
[TBL] [Abstract][Full Text] [Related]
16. Two-, three-, and four-state events occur in the mechanical unfolding of small protein L using molecular dynamics simulation.
Glyakina AV; Balabaev NK; Galzitskaya OV
Protein Pept Lett; 2010 Jan; 17(1):92-103. PubMed ID: 20214632
[TBL] [Abstract][Full Text] [Related]
17. Similarity of force-induced unfolding of apomyoglobin to its chemical-induced unfolding: an atomistic molecular dynamics simulation approach.
Choi HS; Huh J; Jo WH
Biophys J; 2003 Sep; 85(3):1492-502. PubMed ID: 12944267
[TBL] [Abstract][Full Text] [Related]
18. Protein unfolding behavior studied by elastic network model.
Su JG; Li CH; Hao R; Chen WZ; Wang CX
Biophys J; 2008 Jun; 94(12):4586-96. PubMed ID: 18310247
[TBL] [Abstract][Full Text] [Related]
19. The Unfolding Journey of Superoxide Dismutase 1 Barrels under Crowding: Atomistic Simulations Shed Light on Intermediate States and Their Interactions with Crowders.
Timr S; Gnutt D; Ebbinghaus S; Sterpone F
J Phys Chem Lett; 2020 May; 11(10):4206-4212. PubMed ID: 32364389
[TBL] [Abstract][Full Text] [Related]
20. Precursory signatures of protein folding/unfolding: from time series correlation analysis to atomistic mechanisms.
Hsu PJ; Cheong SA; Lai SK
J Chem Phys; 2014 May; 140(20):204905. PubMed ID: 24880323
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
