153 related articles for article (PubMed ID: 29422694)
1. Principal component analysis and the locus of the Fréchet mean in the space of phylogenetic trees.
Nye TMW; Tang X; Weyenberg G; Yoshida R
Biometrika; 2017 Dec; 104(4):901-922. PubMed ID: 29422694
[TBL] [Abstract][Full Text] [Related]
2. Tropical principal component analysis on the space of phylogenetic trees.
Page R; Yoshida R; Zhang L
Bioinformatics; 2020 Nov; 36(17):4590-4598. PubMed ID: 32516398
[TBL] [Abstract][Full Text] [Related]
3. Bounds for phylogenetic network space metrics.
Francis A; Huber KT; Moulton V; Wu T
J Math Biol; 2018 Apr; 76(5):1229-1248. PubMed ID: 28836230
[TBL] [Abstract][Full Text] [Related]
4. Ranked Subtree Prune and Regraft.
Collienne L; Whidden C; Gavryushkin A
Bull Math Biol; 2024 Jan; 86(3):24. PubMed ID: 38294587
[TBL] [Abstract][Full Text] [Related]
5. An efficient algorithm for testing the compatibility of phylogenies with nested taxa.
Deng Y; Fernández-Baca D
Algorithms Mol Biol; 2017; 12():7. PubMed ID: 28331536
[TBL] [Abstract][Full Text] [Related]
6. Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models.
Chauve C; Ponty Y; Wallner M
J Math Biol; 2020 Apr; 80(5):1353-1388. PubMed ID: 32060618
[TBL] [Abstract][Full Text] [Related]
7. Testing the agreement of trees with internal labels.
Fernández-Baca D; Liu L
Algorithms Mol Biol; 2021 Dec; 16(1):22. PubMed ID: 34863219
[TBL] [Abstract][Full Text] [Related]
8. An Algorithm for Constructing Principal Geodesics in Phylogenetic Treespace.
Nye TM
IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(2):304-15. PubMed ID: 26355778
[TBL] [Abstract][Full Text] [Related]
9. Tree-space statistics and approximations for large-scale analysis of anatomical trees.
Feragen A; Owen M; Petersen J; Wille MM; Thomsen LH; Dirksen A; de Bruijne M
Inf Process Med Imaging; 2013; 23():74-85. PubMed ID: 24683959
[TBL] [Abstract][Full Text] [Related]
10. Discrete coalescent trees.
Collienne L; Elmes K; Fischer M; Bryant D; Gavryushkin A
J Math Biol; 2021 Nov; 83(5):60. PubMed ID: 34739608
[TBL] [Abstract][Full Text] [Related]
11. The space of ultrametric phylogenetic trees.
Gavryushkin A; Drummond AJ
J Theor Biol; 2016 Aug; 403():197-208. PubMed ID: 27188249
[TBL] [Abstract][Full Text] [Related]
12. Efficient FPT Algorithms for (Strict) Compatibility of Unrooted Phylogenetic Trees.
Baste J; Paul C; Sau I; Scornavacca C
Bull Math Biol; 2017 Apr; 79(4):920-938. PubMed ID: 28247121
[TBL] [Abstract][Full Text] [Related]
13. The combinatorics of discrete time-trees: theory and open problems.
Gavryushkin A; Whidden C; Matsen FA
J Math Biol; 2018 Apr; 76(5):1101-1121. PubMed ID: 28756523
[TBL] [Abstract][Full Text] [Related]
14. ManifoldNet: A Deep Neural Network for Manifold-Valued Data With Applications.
Chakraborty R; Bouza J; Manton JH; Vemuri BC
IEEE Trans Pattern Anal Mach Intell; 2022 Feb; 44(2):799-810. PubMed ID: 32750791
[TBL] [Abstract][Full Text] [Related]
15. New algorithms for structure informed genome rearrangement.
Ozeri E; Zehavi M; Ziv-Ukelson M
Algorithms Mol Biol; 2023 Dec; 18(1):17. PubMed ID: 38037088
[TBL] [Abstract][Full Text] [Related]
16. Tropical Density Estimation of Phylogenetic Trees.
Yoshida R; Barnhill D; Miura K; Howe D
IEEE/ACM Trans Comput Biol Bioinform; 2024 Jun; PP():. PubMed ID: 38941208
[TBL] [Abstract][Full Text] [Related]
17. Tropical Principal Component Analysis and Its Application to Phylogenetics.
Yoshida R; Zhang L; Zhang X
Bull Math Biol; 2019 Feb; 81(2):568-597. PubMed ID: 30206809
[TBL] [Abstract][Full Text] [Related]
18. Computing nearest neighbour interchange distances between ranked phylogenetic trees.
Collienne L; Gavryushkin A
J Math Biol; 2021 Jan; 82(1-2):8. PubMed ID: 33492606
[TBL] [Abstract][Full Text] [Related]
19. Computing the skewness of the phylogenetic mean pairwise distance in linear time.
Tsirogiannis C; Sandel B
Algorithms Mol Biol; 2014; 9():15. PubMed ID: 25093036
[TBL] [Abstract][Full Text] [Related]
20. Clustering systems of phylogenetic networks.
Hellmuth M; Schaller D; Stadler PF
Theory Biosci; 2023 Nov; 142(4):301-358. PubMed ID: 37573261
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
