These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

174 related articles for article (PubMed ID: 29452392)

  • 1. pBRIT: gene prioritization by correlating functional and phenotypic annotations through integrative data fusion.
    Kumar AA; Van Laer L; Alaerts M; Ardeshirdavani A; Moreau Y; Laukens K; Loeys B; Vandeweyer G
    Bioinformatics; 2018 Jul; 34(13):2254-2262. PubMed ID: 29452392
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Gene prioritization using Bayesian matrix factorization with genomic and phenotypic side information.
    Zakeri P; Simm J; Arany A; ElShal S; Moreau Y
    Bioinformatics; 2018 Jul; 34(13):i447-i456. PubMed ID: 29949967
    [TBL] [Abstract][Full Text] [Related]  

  • 3. OVA: integrating molecular and physical phenotype data from multiple biomedical domain ontologies with variant filtering for enhanced variant prioritization.
    Antanaviciute A; Watson CM; Harrison SM; Lascelles C; Crinnion L; Markham AF; Bonthron DT; Carr IM
    Bioinformatics; 2015 Dec; 31(23):3822-9. PubMed ID: 26272982
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The Human Phenotype Ontology in 2017.
    Köhler S; Vasilevsky NA; Engelstad M; Foster E; McMurry J; Aymé S; Baynam G; Bello SM; Boerkoel CF; Boycott KM; Brudno M; Buske OJ; Chinnery PF; Cipriani V; Connell LE; Dawkins HJ; DeMare LE; Devereau AD; de Vries BB; Firth HV; Freson K; Greene D; Hamosh A; Helbig I; Hum C; Jähn JA; James R; Krause R; F Laulederkind SJ; Lochmüller H; Lyon GJ; Ogishima S; Olry A; Ouwehand WH; Pontikos N; Rath A; Schaefer F; Scott RH; Segal M; Sergouniotis PI; Sever R; Smith CL; Straub V; Thompson R; Turner C; Turro E; Veltman MW; Vulliamy T; Yu J; von Ziegenweidt J; Zankl A; Züchner S; Zemojtel T; Jacobsen JO; Groza T; Smedley D; Mungall CJ; Haendel M; Robinson PN
    Nucleic Acids Res; 2017 Jan; 45(D1):D865-D876. PubMed ID: 27899602
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Transfer learning across ontologies for phenome-genome association prediction.
    Petegrosso R; Park S; Hwang TH; Kuang R
    Bioinformatics; 2017 Feb; 33(4):529-536. PubMed ID: 27797759
    [TBL] [Abstract][Full Text] [Related]  

  • 6. InfAcrOnt: calculating cross-ontology term similarities using information flow by a random walk.
    Cheng L; Jiang Y; Ju H; Sun J; Peng J; Zhou M; Hu Y
    BMC Genomics; 2018 Jan; 19(Suppl 1):919. PubMed ID: 29363423
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Information-theoretic evaluation of predicted ontological annotations.
    Clark WT; Radivojac P
    Bioinformatics; 2013 Jul; 29(13):i53-61. PubMed ID: 23813009
    [TBL] [Abstract][Full Text] [Related]  

  • 8. MCO: towards an ontology and unified vocabulary for a framework-based annotation of microbial growth conditions.
    Tierrafría VH; Mejía-Almonte C; Camacho-Zaragoza JM; Salgado H; Alquicira K; Ishida C; Gama-Castro S; Collado-Vides J
    Bioinformatics; 2019 Mar; 35(5):856-864. PubMed ID: 30137210
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.
    Köhler S; Doelken SC; Mungall CJ; Bauer S; Firth HV; Bailleul-Forestier I; Black GC; Brown DL; Brudno M; Campbell J; FitzPatrick DR; Eppig JT; Jackson AP; Freson K; Girdea M; Helbig I; Hurst JA; Jähn J; Jackson LG; Kelly AM; Ledbetter DH; Mansour S; Martin CL; Moss C; Mumford A; Ouwehand WH; Park SM; Riggs ER; Scott RH; Sisodiya S; Van Vooren S; Wapner RJ; Wilkie AO; Wright CF; Vulto-van Silfhout AT; de Leeuw N; de Vries BB; Washingthon NL; Smith CL; Westerfield M; Schofield P; Ruef BJ; Gkoutos GV; Haendel M; Smedley D; Lewis SE; Robinson PN
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D966-74. PubMed ID: 24217912
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cross-organism learning method to discover new gene functionalities.
    Domeniconi G; Masseroli M; Moro G; Pinoli P
    Comput Methods Programs Biomed; 2016 Apr; 126():20-34. PubMed ID: 26724853
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Onto2Vec: joint vector-based representation of biological entities and their ontology-based annotations.
    Smaili FZ; Gao X; Hoehndorf R
    Bioinformatics; 2018 Jul; 34(13):i52-i60. PubMed ID: 29949999
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Multi-label literature classification based on the Gene Ontology graph.
    Jin B; Muller B; Zhai C; Lu X
    BMC Bioinformatics; 2008 Dec; 9():525. PubMed ID: 19063730
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Searching the Mouse Genome Informatics (MGI) resources for information on mouse biology from genotype to phenotype.
    Shaw DR
    Curr Protoc Bioinformatics; 2009 Mar; Chapter 1():1.7.1-1.7.14. PubMed ID: 19274630
    [TBL] [Abstract][Full Text] [Related]  

  • 14. OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction.
    Smaili FZ; Gao X; Hoehndorf R
    Bioinformatics; 2019 Jun; 35(12):2133-2140. PubMed ID: 30407490
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Bayesian inference of protein-protein interactions from biological literature.
    Chowdhary R; Zhang J; Liu JS
    Bioinformatics; 2009 Jun; 25(12):1536-42. PubMed ID: 19369495
    [TBL] [Abstract][Full Text] [Related]  

  • 16. [From symptom to syndrome using modern software support].
    Köhler S
    Internist (Berl); 2018 Aug; 59(8):766-775. PubMed ID: 29995249
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Increasing phenotypic annotation improves the diagnostic rate of exome sequencing in a rare neuromuscular disorder.
    Thompson R; Papakonstantinou Ntalis A; Beltran S; Töpf A; de Paula Estephan E; Polavarapu K; 't Hoen PAC; Missier P; Lochmüller H
    Hum Mutat; 2019 Oct; 40(10):1797-1812. PubMed ID: 31231902
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A visual and curatorial approach to clinical variant prioritization and disease gene discovery in genome-wide diagnostics.
    James RA; Campbell IM; Chen ES; Boone PM; Rao MA; Bainbridge MN; Lupski JR; Yang Y; Eng CM; Posey JE; Shaw CA
    Genome Med; 2016 Feb; 8(1):13. PubMed ID: 26838676
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The Plant Ontology: A Tool for Plant Genomics.
    Cooper L; Jaiswal P
    Methods Mol Biol; 2016; 1374():89-114. PubMed ID: 26519402
    [TBL] [Abstract][Full Text] [Related]  

  • 20. dcGOR: an R package for analysing ontologies and protein domain annotations.
    Fang H
    PLoS Comput Biol; 2014 Oct; 10(10):e1003929. PubMed ID: 25356683
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.