These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

132 related articles for article (PubMed ID: 29462243)

  • 1. Combining co-evolution and secondary structure prediction to improve fragment library generation.
    de Oliveira SHP; Deane CM
    Bioinformatics; 2018 Jul; 34(13):2219-2227. PubMed ID: 29462243
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Building a better fragment library for de novo protein structure prediction.
    de Oliveira SH; Shi J; Deane CM
    PLoS One; 2015; 10(4):e0123998. PubMed ID: 25901595
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comparing co-evolution methods and their application to template-free protein structure prediction.
    de Oliveira SH; Shi J; Deane CM
    Bioinformatics; 2017 Feb; 33(3):373-381. PubMed ID: 28171606
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Sequential search leads to faster, more efficient fragment-based de novo protein structure prediction.
    de Oliveira SHP; Law EC; Shi J; Deane CM
    Bioinformatics; 2018 Apr; 34(7):1132-1140. PubMed ID: 29136098
    [TBL] [Abstract][Full Text] [Related]  

  • 5. LRFragLib: an effective algorithm to identify fragments for de novo protein structure prediction.
    Wang T; Yang Y; Zhou Y; Gong H
    Bioinformatics; 2017 Mar; 33(5):677-684. PubMed ID: 27797773
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Sphinx: merging knowledge-based and ab initio approaches to improve protein loop prediction.
    Marks C; Nowak J; Klostermann S; Georges G; Dunbar J; Shi J; Kelm S; Deane CM
    Bioinformatics; 2017 May; 33(9):1346-1353. PubMed ID: 28453681
    [TBL] [Abstract][Full Text] [Related]  

  • 7. FRAGSION: ultra-fast protein fragment library generation by IOHMM sampling.
    Bhattacharya D; Adhikari B; Li J; Cheng J
    Bioinformatics; 2016 Jul; 32(13):2059-61. PubMed ID: 27153697
    [TBL] [Abstract][Full Text] [Related]  

  • 8. TCRBuilder: multi-state T-cell receptor structure prediction.
    Wong WK; Marks C; Leem J; Lewis AP; Shi J; Deane CM
    Bioinformatics; 2020 Jun; 36(11):3580-3581. PubMed ID: 32181809
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The evolution of contact prediction: evidence that contact selection in statistical contact prediction is changing.
    Chonofsky M; de Oliveira SHP; Krawczyk K; Deane CM
    Bioinformatics; 2020 Mar; 36(6):1750-1756. PubMed ID: 31693112
    [TBL] [Abstract][Full Text] [Related]  

  • 10. An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier.
    Xia J; Peng Z; Qi D; Mu H; Yang J
    Bioinformatics; 2017 Mar; 33(6):863-870. PubMed ID: 28039166
    [TBL] [Abstract][Full Text] [Related]  

  • 11. iSwathX: an interactive web-based application for extension of DIA peptide reference libraries.
    Noor Z; Wu JX; Pascovici D; Mohamedali A; Molloy MP; Baker MS; Ranganathan S
    Bioinformatics; 2019 Feb; 35(3):538-539. PubMed ID: 30052774
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A de novo protein structure prediction by iterative partition sampling, topology adjustment and residue-level distance deviation optimization.
    Liu J; Zhao KL; He GX; Wang LJ; Zhou XG; Zhang GJ
    Bioinformatics; 2021 Dec; 38(1):99-107. PubMed ID: 34459867
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins.
    Jones DT; Singh T; Kosciolek T; Tetchner S
    Bioinformatics; 2015 Apr; 31(7):999-1006. PubMed ID: 25431331
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Critical Features of Fragment Libraries for Protein Structure Prediction.
    Trevizani R; Custódio FL; Dos Santos KB; Dardenne LE
    PLoS One; 2017; 12(1):e0170131. PubMed ID: 28085928
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Integrating ab initio and template-based algorithms for protein-protein complex structure prediction.
    Vangaveti S; Vreven T; Zhang Y; Weng Z
    Bioinformatics; 2020 Feb; 36(3):751-757. PubMed ID: 31393558
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Protein multiple sequence alignment benchmarking through secondary structure prediction.
    Le Q; Sievers F; Higgins DG
    Bioinformatics; 2017 May; 33(9):1331-1337. PubMed ID: 28093407
    [TBL] [Abstract][Full Text] [Related]  

  • 17. pyHVis3D: visualising molecular simulation deduced H-bond networks in 3D: application to T-cell receptor interactions.
    Knapp B; Alcala M; Zhang H; West CE; van der Merwe PA; Deane CM
    Bioinformatics; 2018 Jun; 34(11):1941-1943. PubMed ID: 29329361
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Reactome diagram viewer: data structures and strategies to boost performance.
    Fabregat A; Sidiropoulos K; Viteri G; Marin-Garcia P; Ping P; Stein L; D'Eustachio P; Hermjakob H
    Bioinformatics; 2018 Apr; 34(7):1208-1214. PubMed ID: 29186351
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Rust-Bio: a fast and safe bioinformatics library.
    Köster J
    Bioinformatics; 2016 Feb; 32(3):444-6. PubMed ID: 26446134
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The Bioinformatics Template Library--generic components for biocomputing.
    Pitt WR; Williams MA; Steven M; Sweeney B; Bleasby AJ; Moss DS
    Bioinformatics; 2001 Aug; 17(8):729-37. PubMed ID: 11524374
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.