218 related articles for article (PubMed ID: 29482522)
1. Distinct core promoter codes drive transcription initiation at key developmental transitions in a marine chordate.
Danks GB; Navratilova P; Lenhard B; Thompson EM
BMC Genomics; 2018 Feb; 19(1):164. PubMed ID: 29482522
[TBL] [Abstract][Full Text] [Related]
2. Two independent transcription initiation codes overlap on vertebrate core promoters.
Haberle V; Li N; Hadzhiev Y; Plessy C; Previti C; Nepal C; Gehrig J; Dong X; Akalin A; Suzuki AM; van IJcken WFJ; Armant O; Ferg M; Strähle U; Carninci P; Müller F; Lenhard B
Nature; 2014 Mar; 507(7492):381-385. PubMed ID: 24531765
[TBL] [Abstract][Full Text] [Related]
3. Characterization of transcription from TATA-less promoters: identification of a new core promoter element XCPE2 and analysis of factor requirements.
Anish R; Hossain MB; Jacobson RH; Takada S
PLoS One; 2009; 4(4):e5103. PubMed ID: 19337366
[TBL] [Abstract][Full Text] [Related]
4. Distinct roles of nucleosome sliding and histone modifications in controlling the fidelity of transcription initiation.
Zhang H; Lu Z; Zhan Y; Rodriguez J; Lu C; Xue Y; Lin Z
RNA Biol; 2021 Nov; 18(11):1642-1652. PubMed ID: 33280509
[TBL] [Abstract][Full Text] [Related]
5. Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis.
Nepal C; Hadzhiev Y; Previti C; Haberle V; Li N; Takahashi H; Suzuki AM; Sheng Y; Abdelhamid RF; Anand S; Gehrig J; Akalin A; Kockx CE; van der Sloot AA; van Ijcken WF; Armant O; Rastegar S; Watson C; Strähle U; Stupka E; Carninci P; Lenhard B; Müller F
Genome Res; 2013 Nov; 23(11):1938-50. PubMed ID: 24002785
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide analysis of core promoter structures in Schizosaccharomyces pombe with DeepCAGE.
Li H; Hou J; Bai L; Hu C; Tong P; Kang Y; Zhao X; Shao Z
RNA Biol; 2015; 12(5):525-37. PubMed ID: 25747261
[TBL] [Abstract][Full Text] [Related]
7. Prevalence of the initiator over the TATA box in human and yeast genes and identification of DNA motifs enriched in human TATA-less core promoters.
Yang C; Bolotin E; Jiang T; Sladek FM; Martinez E
Gene; 2007 Mar; 389(1):52-65. PubMed ID: 17123746
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalis.
Yokomori R; Shimai K; Nishitsuji K; Suzuki Y; Kusakabe TG; Nakai K
Genome Res; 2016 Jan; 26(1):140-50. PubMed ID: 26668163
[TBL] [Abstract][Full Text] [Related]
9. Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters.
Ponjavic J; Lenhard B; Kai C; Kawai J; Carninci P; Hayashizaki Y; Sandelin A
Genome Biol; 2006; 7(8):R78. PubMed ID: 16916456
[TBL] [Abstract][Full Text] [Related]
10. Embryonic tissue differentiation is characterized by transitions in cell cycle dynamic-associated core promoter regulation.
Wragg JW; Roos L; Vucenovic D; Cvetesic N; Lenhard B; Müller F
Nucleic Acids Res; 2020 Sep; 48(15):8374-8392. PubMed ID: 32619237
[TBL] [Abstract][Full Text] [Related]
11. Distinct role of core promoter architecture in regulation of light-mediated responses in plant genes.
Srivastava R; Rai KM; Srivastava M; Kumar V; Pandey B; Singh SP; Bag SK; Singh BD; Tuli R; Sawant SV
Mol Plant; 2014 Apr; 7(4):626-41. PubMed ID: 24177688
[TBL] [Abstract][Full Text] [Related]
12. An unmethylated 3' promoter-proximal region is required for efficient transcription initiation.
Appanah R; Dickerson DR; Goyal P; Groudine M; Lorincz MC
PLoS Genet; 2007 Feb; 3(2):e27. PubMed ID: 17305432
[TBL] [Abstract][Full Text] [Related]
13. TSS seq based core promoter architecture in blood feeding Tsetse fly (Glossina morsitans morsitans) vector of Trypanosomiasis.
Mwangi S; Attardo G; Suzuki Y; Aksoy S; Christoffels A
BMC Genomics; 2015 Sep; 16(1):722. PubMed ID: 26394619
[TBL] [Abstract][Full Text] [Related]
14. Novel core promoter elements in the oomycete pathogen Phytophthora infestans and their influence on expression detected by genome-wide analysis.
Roy S; Poidevin L; Jiang T; Judelson HS
BMC Genomics; 2013 Feb; 14():106. PubMed ID: 23414203
[TBL] [Abstract][Full Text] [Related]
15. Identification of evolutionarily conserved downstream core promoter elements required for the transcriptional regulation of Fushi tarazu target genes.
Shir-Shapira H; Sloutskin A; Adato O; Ovadia-Shochat A; Ideses D; Zehavi Y; Kassavetis G; Kadonaga JT; Unger R; Juven-Gershon T
PLoS One; 2019; 14(4):e0215695. PubMed ID: 30998799
[TBL] [Abstract][Full Text] [Related]
16. Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters.
Erb I; van Nimwegen E
PLoS One; 2011; 6(9):e24279. PubMed ID: 21931670
[TBL] [Abstract][Full Text] [Related]
17. TC-motifs at the TATA-box expected position in plant genes: a novel class of motifs involved in the transcription regulation.
Bernard V; Brunaud V; Lecharny A
BMC Genomics; 2010 Mar; 11():166. PubMed ID: 20222994
[TBL] [Abstract][Full Text] [Related]
18. Core Promoter Plasticity Between Maize Tissues and Genotypes Contrasts with Predominance of Sharp Transcription Initiation Sites.
Mejía-Guerra MK; Li W; Galeano NF; Vidal M; Gray J; Doseff AI; Grotewold E
Plant Cell; 2015 Dec; 27(12):3309-20. PubMed ID: 26628745
[TBL] [Abstract][Full Text] [Related]
19. Finding the start site: redefining the human initiator element.
Kugel JF; Goodrich JA
Genes Dev; 2017 Jan; 31(1):1-2. PubMed ID: 28130343
[TBL] [Abstract][Full Text] [Related]
20. Classification of Promoters Based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns.
Natsume-Kitatani Y; Mamitsuka H
PLoS One; 2016; 11(3):e0151917. PubMed ID: 27003446
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
