BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

194 related articles for article (PubMed ID: 29518463)

  • 1. Sensitive and specific detection of ligands using engineered riboswitches.
    Morse DP; Nevins CE; Aggrey-Fynn J; Bravo RJ; Pfaeffle HOI; Laney JE
    J Biotechnol; 2018 Apr; 272-273():22-32. PubMed ID: 29518463
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Mechanisms for differentiation between cognate and near-cognate ligands by purine riboswitches.
    Wacker A; Buck J; Richter C; Schwalbe H; Wöhnert J
    RNA Biol; 2012 May; 9(5):672-80. PubMed ID: 22647526
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Design and antimicrobial action of purine analogues that bind Guanine riboswitches.
    Kim JN; Blount KF; Puskarz I; Lim J; Link KH; Breaker RR
    ACS Chem Biol; 2009 Nov; 4(11):915-27. PubMed ID: 19739679
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity.
    Weinberg Z; Nelson JW; Lünse CE; Sherlock ME; Breaker RR
    Proc Natl Acad Sci U S A; 2017 Mar; 114(11):E2077-E2085. PubMed ID: 28265071
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Single-molecule analysis reveals multi-state folding of a guanine riboswitch.
    Chandra V; Hannan Z; Xu H; Mandal M
    Nat Chem Biol; 2017 Feb; 13(2):194-201. PubMed ID: 27941758
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation.
    Steinert H; Sochor F; Wacker A; Buck J; Helmling C; Hiller F; Keyhani S; Noeske J; Grimm S; Rudolph MM; Keller H; Mooney RA; Landick R; Suess B; Fürtig B; Wöhnert J; Schwalbe H
    Elife; 2017 May; 6():. PubMed ID: 28541183
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Structural basis of differential ligand recognition by two classes of bis-(3'-5')-cyclic dimeric guanosine monophosphate-binding riboswitches.
    Smith KD; Shanahan CA; Moore EL; Simon AC; Strobel SA
    Proc Natl Acad Sci U S A; 2011 May; 108(19):7757-62. PubMed ID: 21518891
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Optimization of RNA-based c-di-GMP fluorescent sensors through tuning their structural modules.
    Inuzuka S; Matsumura S; Ikawa Y
    J Biosci Bioeng; 2016 Aug; 122(2):183-7. PubMed ID: 26968125
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dissecting the influence of Mg2+ on 3D architecture and ligand-binding of the guanine-sensing riboswitch aptamer domain.
    Buck J; Noeske J; Wöhnert J; Schwalbe H
    Nucleic Acids Res; 2010 Jul; 38(12):4143-53. PubMed ID: 20200045
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The dynamic nature of RNA as key to understanding riboswitch mechanisms.
    Haller A; Soulière MF; Micura R
    Acc Chem Res; 2011 Dec; 44(12):1339-48. PubMed ID: 21678902
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain.
    Gilbert SD; Stoddard CD; Wise SJ; Batey RT
    J Mol Biol; 2006 Jun; 359(3):754-68. PubMed ID: 16650860
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Mutational analysis of the purine riboswitch aptamer domain.
    Gilbert SD; Love CE; Edwards AL; Batey RT
    Biochemistry; 2007 Nov; 46(46):13297-309. PubMed ID: 17960911
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Interplay of 'induced fit' and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch.
    Noeske J; Buck J; Fürtig B; Nasiri HR; Schwalbe H; Wöhnert J
    Nucleic Acids Res; 2007; 35(2):572-83. PubMed ID: 17175531
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Imaging metabolite dynamics in living cells using a Spinach-based riboswitch.
    You M; Litke JL; Jaffrey SR
    Proc Natl Acad Sci U S A; 2015 May; 112(21):E2756-65. PubMed ID: 25964329
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Adenine protonation enables cyclic-di-GMP binding to cyclic-GAMP sensing riboswitches.
    Keller H; Weickhmann AK; Bock T; Wöhnert J
    RNA; 2018 Oct; 24(10):1390-1402. PubMed ID: 30006500
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs.
    Serganov A; Yuan YR; Pikovskaya O; Polonskaia A; Malinina L; Phan AT; Hobartner C; Micura R; Breaker RR; Patel DJ
    Chem Biol; 2004 Dec; 11(12):1729-41. PubMed ID: 15610857
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Characterization of the dual regulation by a c-di-GMP riboswitch Bc1 with a long expression platform from
    Liu L; Luo D; Zhang Y; Liu D; Yin K; Tang Q; Chou S-H; He J
    Microbiol Spectr; 2024 Jul; 12(7):e0045024. PubMed ID: 38819160
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structural insights into the interactions of xpt riboswitch with novel guanine analogues: a molecular dynamics simulation study.
    Jain SS; Sonavane UB; Uppuladinne MV; McLaughlin EC; Wang W; Black S; Joshi RR
    J Biomol Struct Dyn; 2015; 33(2):234-43. PubMed ID: 24404773
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Riboswitch-Mediated Detection of Metabolite Fluctuations During Live Cell Imaging of Bacteria.
    Weiss CA; Winkler WC
    Methods Mol Biol; 2021; 2323():153-170. PubMed ID: 34086280
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Ligand Selectivity Mechanism and Conformational Changes in Guanine Riboswitch by Molecular Dynamics Simulations and Free Energy Calculations.
    Hu G; Ma A; Wang J
    J Chem Inf Model; 2017 Apr; 57(4):918-928. PubMed ID: 28345904
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.