These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

203 related articles for article (PubMed ID: 29523803)

  • 1. Automated high throughput animal CO1 metabarcode classification.
    Porter TM; Hajibabaei M
    Sci Rep; 2018 Mar; 8(1):4226. PubMed ID: 29523803
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale.
    Krehenwinkel H; Pomerantz A; Henderson JB; Kennedy SR; Lim JY; Swamy V; Shoobridge JD; Graham N; Patel NH; Gillespie RG; Prost S
    Gigascience; 2019 May; 8(5):. PubMed ID: 30824940
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A DNA barcode library for 5,200 German flies and midges (Insecta: Diptera) and its implications for metabarcoding-based biomonitoring.
    Morinière J; Balke M; Doczkal D; Geiger MF; Hardulak LA; Haszprunar G; Hausmann A; Hendrich L; Regalado L; Rulik B; Schmidt S; Wägele JW; Hebert PDN
    Mol Ecol Resour; 2019 Jul; 19(4):900-928. PubMed ID: 30977972
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A comprehensive DNA barcoding reference database for Plecoptera of Switzerland.
    Vuataz L; Reding JP; Reding A; Roesti C; Stoffel C; Vinçon G; Gattolliat JL
    Sci Rep; 2024 Mar; 14(1):6322. PubMed ID: 38491157
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Two new computational methods for universal DNA barcoding: a benchmark using barcode sequences of bacteria, archaea, animals, fungi, and land plants.
    Tanabe AS; Toju H
    PLoS One; 2013; 8(10):e76910. PubMed ID: 24204702
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Just keep it simple? Benchmarking the accuracy of taxonomy assignment software in metabarcoding studies.
    Bik HM
    Mol Ecol Resour; 2021 Oct; 21(7):2187-2189. PubMed ID: 34268901
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Why the COI barcode should be the community DNA metabarcode for the metazoa.
    Andújar C; Arribas P; Yu DW; Vogler AP; Emerson BC
    Mol Ecol; 2018 Oct; 27(20):3968-3975. PubMed ID: 30129071
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Inclusion of database outgroups reduces false positives in fungal metabarcoding taxonomic assignments.
    Rawson C; Zahn G
    Mycologia; 2023; 115(4):571-577. PubMed ID: 37196170
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Species Identification in Malaise Trap Samples by DNA Barcoding Based on NGS Technologies and a Scoring Matrix.
    Morinière J; Cancian de Araujo B; Lam AW; Hausmann A; Balke M; Schmidt S; Hendrich L; Doczkal D; Fartmann B; Arvidsson S; Haszprunar G
    PLoS One; 2016; 11(5):e0155497. PubMed ID: 27191722
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Automated DNA-based plant identification for large-scale biodiversity assessment.
    Papadopoulou A; Chesters D; Coronado I; De la Cadena G; Cardoso A; Reyes JC; Maes JM; Rueda RM; Gómez-Zurita J
    Mol Ecol Resour; 2015 Jan; 15(1):136-52. PubMed ID: 24666885
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Debar: A sequence-by-sequence denoiser for COI-5P DNA barcode data.
    Nugent CM; Elliott TA; Ratnasingham S; Hebert PDN; Adamowicz SJ
    Mol Ecol Resour; 2021 Nov; 21(8):2832-2846. PubMed ID: 33749132
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Metabarcoding for biodiversity inventory blind spots: A test case using the beetle fauna of an insular cloud forest.
    Arjona Y; Arribas P; Salces-Castellano A; López H; Emerson BC; Andújar C
    Mol Ecol; 2023 Dec; 32(23):6130-6146. PubMed ID: 36197789
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The HTS barcode checker pipeline, a tool for automated detection of illegally traded species from high-throughput sequencing data.
    Lammers Y; Peelen T; Vos RA; Gravendeel B
    BMC Bioinformatics; 2014 Feb; 15():44. PubMed ID: 24502833
    [TBL] [Abstract][Full Text] [Related]  

  • 14. How reliable is metabarcoding for pollen identification? An evaluation of different taxonomic assignment strategies by cross-validation.
    San Martin G; Hautier L; Mingeot D; Dubois B
    PeerJ; 2024; 12():e16567. PubMed ID: 38313030
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Skimming for barcodes: rapid production of mitochondrial genome and nuclear ribosomal repeat reference markers through shallow shotgun sequencing.
    Hoban ML; Whitney J; Collins AG; Meyer C; Murphy KR; Reft AJ; Bemis KE
    PeerJ; 2022; 10():e13790. PubMed ID: 35959477
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses.
    Keck F; Couton M; Altermatt F
    Mol Ecol Resour; 2023 May; 23(4):742-755. PubMed ID: 36478393
    [TBL] [Abstract][Full Text] [Related]  

  • 17. FuzzyID2: A software package for large data set species identification via barcoding and metabarcoding using hidden Markov models and fuzzy set methods.
    Shi ZY; Yang CQ; Hao MD; Wang XY; Ward RD; Zhang AB
    Mol Ecol Resour; 2018 May; 18(3):666-675. PubMed ID: 29154499
    [TBL] [Abstract][Full Text] [Related]  

  • 18. 50%, not great, not terrible: Pan-European gap-analysis shows the real status of the DNA barcode reference libraries in two aquatic invertebrate groups and points the way ahead.
    Csabai Z; Čiamporová-Zaťovičová Z; Boda P; Čiampor F
    Sci Total Environ; 2023 Mar; 863():160922. PubMed ID: 36539085
    [TBL] [Abstract][Full Text] [Related]  

  • 19. BAGS: An automated Barcode, Audit & Grade System for DNA barcode reference libraries.
    Fontes JT; Vieira PE; Ekrem T; Soares P; Costa FO
    Mol Ecol Resour; 2021 Feb; 21(2):573-583. PubMed ID: 33000878
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Metabarcoding of freshwater invertebrates to detect the effects of a pesticide spill.
    Andújar C; Arribas P; Gray C; Bruce C; Woodward G; Yu DW; Vogler AP
    Mol Ecol; 2018 Jan; 27(1):146-166. PubMed ID: 29113023
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.