These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

216 related articles for article (PubMed ID: 29558112)

  • 1. Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories.
    Cardoso JGR; Jensen K; Lieven C; Lærke Hansen AS; Galkina S; Beber M; Özdemir E; Herrgård MJ; Redestig H; Sonnenschein N
    ACS Synth Biol; 2018 Apr; 7(4):1163-1166. PubMed ID: 29558112
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-Scale
    Ando D; García Martín H
    Methods Mol Biol; 2019; 1859():317-345. PubMed ID: 30421239
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics.
    Egea JA; Henriques D; Cokelaer T; Villaverde AF; MacNamara A; Danciu DP; Banga JR; Saez-Rodriguez J
    BMC Bioinformatics; 2014 May; 15():136. PubMed ID: 24885957
    [TBL] [Abstract][Full Text] [Related]  

  • 4. pySBOL: A Python Package for Genetic Design Automation and Standardization.
    Bartley BA; Choi K; Samineni M; Zundel Z; Nguyen T; Myers CJ; Sauro HM
    ACS Synth Biol; 2019 Jul; 8(7):1515-1518. PubMed ID: 30424601
    [TBL] [Abstract][Full Text] [Related]  

  • 5. OptFlux: an open-source software platform for in silico metabolic engineering.
    Rocha I; Maia P; Evangelista P; Vilaça P; Soares S; Pinto JP; Nielsen J; Patil KR; Ferreira EC; Rocha M
    BMC Syst Biol; 2010 Apr; 4():45. PubMed ID: 20403172
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Two-Scale
    Ando D; Garcia Martin H
    Methods Mol Biol; 2018; 1671():333-352. PubMed ID: 29170969
    [TBL] [Abstract][Full Text] [Related]  

  • 7. GReNaDIne: A Data-Driven Python Library to Infer Gene Regulatory Networks from Gene Expression Data.
    Schmitt P; Sorin B; Frouté T; Parisot N; Calevro F; Peignier S
    Genes (Basel); 2023 Jan; 14(2):. PubMed ID: 36833196
    [No Abstract]   [Full Text] [Related]  

  • 8. Using flux balance analysis to guide microbial metabolic engineering.
    Curran KA; Crook NC; Alper HS
    Methods Mol Biol; 2012; 834():197-216. PubMed ID: 22144361
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MetaNET--a web-accessible interactive platform for biological metabolic network analysis.
    Narang P; Khan S; Hemrom AJ; ; Lynn AM
    BMC Syst Biol; 2014; 8():130. PubMed ID: 25779921
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Sharing Programming Resources Between Bio* Projects.
    Bonnal RJP; Yates A; Goto N; Gautier L; Willis S; Fields C; Katayama T; Prins P
    Methods Mol Biol; 2019; 1910():747-766. PubMed ID: 31278684
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sharing programming resources between Bio* projects through remote procedure call and native call stack strategies.
    Prins P; Goto N; Yates A; Gautier L; Willis S; Fields C; Katayama T
    Methods Mol Biol; 2012; 856():513-27. PubMed ID: 22399473
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Recent advances in systems metabolic engineering tools and strategies.
    Chae TU; Choi SY; Kim JW; Ko YS; Lee SY
    Curr Opin Biotechnol; 2017 Oct; 47():67-82. PubMed ID: 28675826
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The Genome-Based Metabolic Systems Engineering to Boost Levan Production in a Halophilic Bacterial Model.
    Aydin B; Ozer T; Oner ET; Arga KY
    OMICS; 2018 Mar; 22(3):198-209. PubMed ID: 29649388
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SED-ED, a workflow editor for computational biology experiments written in SED-ML.
    Adams RR
    Bioinformatics; 2012 Apr; 28(8):1180-1. PubMed ID: 22368254
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Truncated branch and bound achieves efficient constraint-based genetic design.
    Egen D; Lun DS
    Bioinformatics; 2012 Jun; 28(12):1619-23. PubMed ID: 22543499
    [TBL] [Abstract][Full Text] [Related]  

  • 16. An integrated network visualization framework towards metabolic engineering applications.
    Noronha A; Vilaça P; Rocha M
    BMC Bioinformatics; 2014 Dec; 15(1):420. PubMed ID: 25547011
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Biskit--a software platform for structural bioinformatics.
    Grünberg R; Nilges M; Leckner J
    Bioinformatics; 2007 Mar; 23(6):769-70. PubMed ID: 17237072
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evolutionary programming as a platform for in silico metabolic engineering.
    Patil KR; Rocha I; Förster J; Nielsen J
    BMC Bioinformatics; 2005 Dec; 6():308. PubMed ID: 16375763
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Deriving metabolic engineering strategies from genome-scale modeling with flux ratio constraints.
    Yen JY; Nazem-Bokaee H; Freedman BG; Athamneh AI; Senger RS
    Biotechnol J; 2013 May; 8(5):581-94. PubMed ID: 23460591
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Stochastic simulation GUI for biochemical networks.
    Vallabhajosyula RR; Sauro HM
    Bioinformatics; 2007 Jul; 23(14):1859-61. PubMed ID: 17586553
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.