218 related articles for article (PubMed ID: 29590295)
1. Functional annotation of genomic variants in studies of late-onset Alzheimer's disease.
Butkiewicz M; Blue EE; Leung YY; Jian X; Marcora E; Renton AE; Kuzma A; Wang LS; Koboldt DC; Haines JL; Bush WS
Bioinformatics; 2018 Aug; 34(16):2724-2731. PubMed ID: 29590295
[TBL] [Abstract][Full Text] [Related]
2. NIAGADS Alzheimer's GenomicsDB: A resource for exploring Alzheimer's disease genetic and genomic knowledge.
Greenfest-Allen E; Valladares O; Kuksa PP; Gangadharan P; Lee WP; Cifello J; Katanic Z; Kuzma AB; Wheeler N; Bush WS; Leung YY; Schellenberg G; Stoeckert CJ; Wang LS
Alzheimers Dement; 2024 Feb; 20(2):1123-1136. PubMed ID: 37881831
[TBL] [Abstract][Full Text] [Related]
3. SNiPA: an interactive, genetic variant-centered annotation browser.
Arnold M; Raffler J; Pfeufer A; Suhre K; Kastenmüller G
Bioinformatics; 2015 Apr; 31(8):1334-6. PubMed ID: 25431330
[TBL] [Abstract][Full Text] [Related]
4. GLANET: genomic loci annotation and enrichment tool.
Otlu B; Firtina C; Keles S; Tastan O
Bioinformatics; 2017 Sep; 33(18):2818-2828. PubMed ID: 28541490
[TBL] [Abstract][Full Text] [Related]
5. annotatr: genomic regions in context.
Cavalcante RG; Sartor MA
Bioinformatics; 2017 Aug; 33(15):2381-2383. PubMed ID: 28369316
[TBL] [Abstract][Full Text] [Related]
6. Segway 2.0: Gaussian mixture models and minibatch training.
Chan RCW; Libbrecht MW; Roberts EG; Bilmes JA; Noble WS; Hoffman MM
Bioinformatics; 2018 Feb; 34(4):669-671. PubMed ID: 29028889
[TBL] [Abstract][Full Text] [Related]
7. BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
Simão FA; Waterhouse RM; Ioannidis P; Kriventseva EV; Zdobnov EM
Bioinformatics; 2015 Oct; 31(19):3210-2. PubMed ID: 26059717
[TBL] [Abstract][Full Text] [Related]
8. Mitochondrial Disease Sequence Data Resource (MSeqDR): a global grass-roots consortium to facilitate deposition, curation, annotation, and integrated analysis of genomic data for the mitochondrial disease clinical and research communities.
Falk MJ; Shen L; Gonzalez M; Leipzig J; Lott MT; Stassen AP; Diroma MA; Navarro-Gomez D; Yeske P; Bai R; Boles RG; Brilhante V; Ralph D; DaRe JT; Shelton R; Terry SF; Zhang Z; Copeland WC; van Oven M; Prokisch H; Wallace DC; Attimonelli M; Krotoski D; Zuchner S; Gai X; ; ; ; ; ;
Mol Genet Metab; 2015 Mar; 114(3):388-96. PubMed ID: 25542617
[TBL] [Abstract][Full Text] [Related]
9. VCPA: genomic variant calling pipeline and data management tool for Alzheimer's Disease Sequencing Project.
Leung YY; Valladares O; Chou YF; Lin HJ; Kuzma AB; Cantwell L; Qu L; Gangadharan P; Salerno WJ; Schellenberg GD; Wang LS
Bioinformatics; 2019 May; 35(10):1768-1770. PubMed ID: 30351394
[TBL] [Abstract][Full Text] [Related]
10. GOThresher: a program to remove annotation biases from protein function annotation datasets.
Joshi P; Banerjee S; Hu X; Khade PM; Friedberg I
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36688705
[TBL] [Abstract][Full Text] [Related]
11. Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline.
Lee IH; Lee K; Hsing M; Choe Y; Park JH; Kim SH; Bohn JM; Neu MB; Hwang KB; Green RC; Kohane IS; Kong SW
Hum Mutat; 2014 May; 35(5):537-47. PubMed ID: 24478219
[TBL] [Abstract][Full Text] [Related]
12. Alzheimer's Disease Variant Portal: A Catalog of Genetic Findings for Alzheimer's Disease.
Kuksa PP; Liu CL; Fu W; Qu L; Zhao Y; Katanic Z; Clark K; Kuzma AB; Ho PC; Tzeng KT; Valladares O; Chou SY; Naj AC; Schellenberg GD; Wang LS; Leung YY
J Alzheimers Dis; 2022; 86(1):461-477. PubMed ID: 35068457
[TBL] [Abstract][Full Text] [Related]
13. FAVOR: functional annotation of variants online resource and annotator for variation across the human genome.
Zhou H; Arapoglou T; Li X; Li Z; Zheng X; Moore J; Asok A; Kumar S; Blue EE; Buyske S; Cox N; Felsenfeld A; Gerstein M; Kenny E; Li B; Matise T; Philippakis A; Rehm HL; Sofia HJ; Snyder G; ; Weng Z; Neale B; Sunyaev SR; Lin X
Nucleic Acids Res; 2023 Jan; 51(D1):D1300-D1311. PubMed ID: 36350676
[TBL] [Abstract][Full Text] [Related]
14. Chado controller: advanced annotation management with a community annotation system.
Guignon V; Droc G; Alaux M; Baurens FC; Garsmeur O; Poiron C; Carver T; Rouard M; Bocs S
Bioinformatics; 2012 Apr; 28(7):1054-6. PubMed ID: 22285827
[TBL] [Abstract][Full Text] [Related]
15. In-depth annotation of SNPs arising from resequencing projects using NGS-SNP.
Grant JR; Arantes AS; Liao X; Stothard P
Bioinformatics; 2011 Aug; 27(16):2300-1. PubMed ID: 21697123
[TBL] [Abstract][Full Text] [Related]
16. Ensembl 2019.
Cunningham F; Achuthan P; Akanni W; Allen J; Amode MR; Armean IM; Bennett R; Bhai J; Billis K; Boddu S; Cummins C; Davidson C; Dodiya KJ; Gall A; Girón CG; Gil L; Grego T; Haggerty L; Haskell E; Hourlier T; Izuogu OG; Janacek SH; Juettemann T; Kay M; Laird MR; Lavidas I; Liu Z; Loveland JE; Marugán JC; Maurel T; McMahon AC; Moore B; Morales J; Mudge JM; Nuhn M; Ogeh D; Parker A; Parton A; Patricio M; Abdul Salam AI; Schmitt BM; Schuilenburg H; Sheppard D; Sparrow H; Stapleton E; Szuba M; Taylor K; Threadgold G; Thormann A; Vullo A; Walts B; Winterbottom A; Zadissa A; Chakiachvili M; Frankish A; Hunt SE; Kostadima M; Langridge N; Martin FJ; Muffato M; Perry E; Ruffier M; Staines DM; Trevanion SJ; Aken BL; Yates AD; Zerbino DR; Flicek P
Nucleic Acids Res; 2019 Jan; 47(D1):D745-D751. PubMed ID: 30407521
[TBL] [Abstract][Full Text] [Related]
17. In Silico Functional Annotation of Genomic Variation.
Butkiewicz M; Bush WS
Curr Protoc Hum Genet; 2016 Jan; 88():6.15.1-6.15.17. PubMed ID: 26724722
[TBL] [Abstract][Full Text] [Related]
18. Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer.
de Bruijn I; Li X; Sumer SO; Gross B; Sheridan R; Ochoa A; Wilson M; Wang A; Zhang H; Lisman A; Abeshouse A; Zhang E; Thum A; Sadagopan A; Heins Z; Kandoth C; Rodenburg S; Tan S; Lukasse P; van Hagen S; Fijneman RJA; Meijer GA; Schultz N; Gao J
JCO Clin Cancer Inform; 2022 Feb; 6():e2100144. PubMed ID: 35148171
[TBL] [Abstract][Full Text] [Related]
19. Systematic tissue-specific functional annotation of the human genome highlights immune-related DNA elements for late-onset Alzheimer's disease.
Lu Q; Powles RL; Abdallah S; Ou D; Wang Q; Hu Y; Lu Y; Liu W; Li B; Mukherjee S; Crane PK; Zhao H
PLoS Genet; 2017 Jul; 13(7):e1006933. PubMed ID: 28742084
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]