228 related articles for article (PubMed ID: 29621277)
1. Horizontal gene transfer of Chlamydia: Novel insights from tree reconciliation.
Kim H; Kwak W; Yoon SH; Kang DK; Kim H
PLoS One; 2018; 13(4):e0195139. PubMed ID: 29621277
[TBL] [Abstract][Full Text] [Related]
2. Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.
Mirkin BG; Fenner TI; Galperin MY; Koonin EV
BMC Evol Biol; 2003 Jan; 3():2. PubMed ID: 12515582
[TBL] [Abstract][Full Text] [Related]
3. HGTree v2.0: a comprehensive database update for horizontal gene transfer (HGT) events detected by the tree-reconciliation method.
Choi Y; Ahn S; Park M; Lee S; Cho S; Kim H
Nucleic Acids Res; 2023 Jan; 51(D1):D1010-D1018. PubMed ID: 36350646
[TBL] [Abstract][Full Text] [Related]
4. Speciation in Chlamydia: genomewide phylogenetic analyses identified a reliable set of acquired genes.
Ortutay C; Gáspári Z; Tóth G; Jáger E; Vida G; Orosz L; Vellai T
J Mol Evol; 2003 Dec; 57(6):672-80. PubMed ID: 14745536
[TBL] [Abstract][Full Text] [Related]
5. The cobweb of life revealed by genome-scale estimates of horizontal gene transfer.
Ge F; Wang LS; Kim J
PLoS Biol; 2005 Oct; 3(10):e316. PubMed ID: 16122348
[TBL] [Abstract][Full Text] [Related]
6. HGTree: database of horizontally transferred genes determined by tree reconciliation.
Jeong H; Sung S; Kwon T; Seo M; Caetano-Anollés K; Choi SH; Cho S; Nasir A; Kim H
Nucleic Acids Res; 2016 Jan; 44(D1):D610-9. PubMed ID: 26578597
[TBL] [Abstract][Full Text] [Related]
7. To tree or not to tree? Genome-wide quantification of recombination and reticulate evolution during the diversification of strict intracellular bacteria.
Hernández-López A; Chabrol O; Royer-Carenzi M; Merhej V; Pontarotti P; Raoult D
Genome Biol Evol; 2013; 5(12):2305-17. PubMed ID: 24259310
[TBL] [Abstract][Full Text] [Related]
8. Comparative Genomic Analysis Reveals the Distribution, Organization, and Evolution of Metal Resistance Genes in the Genus
Li L; Liu Z; Meng D; Liu X; Li X; Zhang M; Tao J; Gu Y; Zhong S; Yin H
Appl Environ Microbiol; 2019 Jan; 85(2):. PubMed ID: 30389769
[TBL] [Abstract][Full Text] [Related]
9. A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm.
Podell S; Gaasterland T; Allen EE
BMC Bioinformatics; 2008 Oct; 9():419. PubMed ID: 18840280
[TBL] [Abstract][Full Text] [Related]
10. Comparing two Bayesian methods for gene tree/species tree reconstruction: simulations with incomplete lineage sorting and horizontal gene transfer.
Chung Y; Ané C
Syst Biol; 2011 May; 60(3):261-75. PubMed ID: 21368324
[TBL] [Abstract][Full Text] [Related]
11. Adaptive Evolution of Extreme Acidophile Sulfobacillus thermosulfidooxidans Potentially Driven by Horizontal Gene Transfer and Gene Loss.
Zhang X; Liu X; Liang Y; Guo X; Xiao Y; Ma L; Miao B; Liu H; Peng D; Huang W; Zhang Y; Yin H
Appl Environ Microbiol; 2017 Apr; 83(7):. PubMed ID: 28115381
[TBL] [Abstract][Full Text] [Related]
12. Rare Events of Intragenus and Intraspecies Horizontal Transfer of the 16S rRNA Gene.
Tian RM; Cai L; Zhang WP; Cao HL; Qian PY
Genome Biol Evol; 2015 Jul; 7(8):2310-20. PubMed ID: 26220935
[TBL] [Abstract][Full Text] [Related]
13. Global extent of horizontal gene transfer.
Choi IG; Kim SH
Proc Natl Acad Sci U S A; 2007 Mar; 104(11):4489-94. PubMed ID: 17360551
[TBL] [Abstract][Full Text] [Related]
14. Horizontal gene transfer in fungi.
Fitzpatrick DA
FEMS Microbiol Lett; 2012 Apr; 329(1):1-8. PubMed ID: 22112233
[TBL] [Abstract][Full Text] [Related]
15. Horizontal gene transfer in human-associated microorganisms inferred by phylogenetic reconstruction and reconciliation.
Jeong H; Arif B; Caetano-Anollés G; Kim KM; Nasir A
Sci Rep; 2019 Apr; 9(1):5953. PubMed ID: 30976019
[TBL] [Abstract][Full Text] [Related]
16. Inter-phylum HGT has shaped the metabolism of many mesophilic and anaerobic bacteria.
Caro-Quintero A; Konstantinidis KT
ISME J; 2015 Mar; 9(4):958-67. PubMed ID: 25314320
[TBL] [Abstract][Full Text] [Related]
17. Detecting horizontal gene transfer: a probabilistic approach.
Sevillya G; Adato O; Snir S
BMC Genomics; 2020 Mar; 21(Suppl 1):106. PubMed ID: 32138652
[TBL] [Abstract][Full Text] [Related]
18. Identification of horizontally transferred genes in the genus Colletotrichum reveals a steady tempo of bacterial to fungal gene transfer.
Jaramillo VD; Sukno SA; Thon MR
BMC Genomics; 2015 Jan; 16(1):2. PubMed ID: 25555398
[TBL] [Abstract][Full Text] [Related]
19. A Preliminary List of Horizontally Transferred Genes in Prokaryotes Determined by Tree Reconstruction and Reconciliation.
Jeong H; Nasir A
Front Genet; 2017; 8():112. PubMed ID: 28894459
[TBL] [Abstract][Full Text] [Related]
20. Identical sequences found in distant genomes reveal frequent horizontal transfer across the bacterial domain.
Sheinman M; Arkhipova K; Arndt PF; Dutilh BE; Hermsen R; Massip F
Elife; 2021 Jun; 10():. PubMed ID: 34121661
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
