471 related articles for article (PubMed ID: 29659724)
1. Efficient population-scale variant analysis and prioritization with VAPr.
Birmingham A; Mark AM; Mazzaferro C; Xu G; Fisch KM
Bioinformatics; 2018 Aug; 34(16):2843-2845. PubMed ID: 29659724
[TBL] [Abstract][Full Text] [Related]
2. Simulating Illumina metagenomic data with InSilicoSeq.
Gourlé H; Karlsson-Lindsjö O; Hayer J; Bongcam-Rudloff E
Bioinformatics; 2019 Feb; 35(3):521-522. PubMed ID: 30016412
[TBL] [Abstract][Full Text] [Related]
3. Interactive network visualization in Jupyter notebooks: visJS2jupyter.
Rosenthal SB; Len J; Webster M; Gary A; Birmingham A; Fisch KM
Bioinformatics; 2018 Jan; 34(1):126-128. PubMed ID: 28968701
[TBL] [Abstract][Full Text] [Related]
4. Gos: a declarative library for interactive genomics visualization in Python.
Manz T; L'Yi S; Gehlenborg N
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36688709
[TBL] [Abstract][Full Text] [Related]
5. Goldilocks: a tool for identifying genomic regions that are 'just right'.
Nicholls SM; Clare A; Randall JC
Bioinformatics; 2016 Jul; 32(13):2047-9. PubMed ID: 27153673
[TBL] [Abstract][Full Text] [Related]
6. Pygenprop: a Python library for programmatic exploration and comparison of organism genome properties.
Bergstrand LH; Neufeld JD; Doxey AC
Bioinformatics; 2019 Dec; 35(23):5063-5065. PubMed ID: 31240307
[TBL] [Abstract][Full Text] [Related]
7. Analysing high-throughput sequencing data in Python with HTSeq 2.0.
Putri GH; Anders S; Pyl PT; Pimanda JE; Zanini F
Bioinformatics; 2022 May; 38(10):2943-2945. PubMed ID: 35561197
[TBL] [Abstract][Full Text] [Related]
8. Pybedtools: a flexible Python library for manipulating genomic datasets and annotations.
Dale RK; Pedersen BS; Quinlan AR
Bioinformatics; 2011 Dec; 27(24):3423-4. PubMed ID: 21949271
[TBL] [Abstract][Full Text] [Related]
9. PyIOmica: longitudinal omics analysis and trend identification.
Domanskyi S; Piermarocchi C; Mias GI
Bioinformatics; 2020 Apr; 36(7):2306-2307. PubMed ID: 31778155
[TBL] [Abstract][Full Text] [Related]
10. PERF: an exhaustive algorithm for ultra-fast and efficient identification of microsatellites from large DNA sequences.
Avvaru AK; Sowpati DT; Mishra RK
Bioinformatics; 2018 Mar; 34(6):943-948. PubMed ID: 29121165
[TBL] [Abstract][Full Text] [Related]
11. A Python package for parsing, validating, mapping and formatting sequence variants using HGVS nomenclature.
Hart RK; Rico R; Hare E; Garcia J; Westbrook J; Fusaro VA
Bioinformatics; 2015 Jan; 31(2):268-70. PubMed ID: 25273102
[TBL] [Abstract][Full Text] [Related]
12. SnapperDB: a database solution for routine sequencing analysis of bacterial isolates.
Dallman T; Ashton P; Schafer U; Jironkin A; Painset A; Shaaban S; Hartman H; Myers R; Underwood A; Jenkins C; Grant K
Bioinformatics; 2018 Sep; 34(17):3028-3029. PubMed ID: 29659710
[TBL] [Abstract][Full Text] [Related]
13. JBrowse Jupyter: a Python interface to JBrowse 2.
De Jesus Martinez T; Hershberg EA; Guo E; Stevens GJ; Diesh C; Xie P; Bridge C; Cain S; Haw R; Buels RM; Stein LD; Holmes IH
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36648320
[TBL] [Abstract][Full Text] [Related]
14. FILTUS: a desktop GUI for fast and efficient detection of disease-causing variants, including a novel autozygosity detector.
Vigeland MD; Gjøtterud KS; Selmer KK
Bioinformatics; 2016 May; 32(10):1592-4. PubMed ID: 26819469
[TBL] [Abstract][Full Text] [Related]
15. PyRanges: efficient comparison of genomic intervals in Python.
Stovner EB; Sætrom P
Bioinformatics; 2020 Feb; 36(3):918-919. PubMed ID: 31373614
[TBL] [Abstract][Full Text] [Related]
16. NGLview-interactive molecular graphics for Jupyter notebooks.
Nguyen H; Case DA; Rose AS
Bioinformatics; 2018 Apr; 34(7):1241-1242. PubMed ID: 29236954
[TBL] [Abstract][Full Text] [Related]
17. SIMBSIG: similarity search and clustering for biobank-scale data.
Adamer MF; Roellin E; Bourguignon L; Borgwardt K
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36610707
[TBL] [Abstract][Full Text] [Related]
18. FARAO: the flexible all-round annotation organizer.
Hammarén R; Pal C; Bengtsson-Palme J
Bioinformatics; 2016 Dec; 32(23):3664-3666. PubMed ID: 27493193
[TBL] [Abstract][Full Text] [Related]
19. BioBlend: automating pipeline analyses within Galaxy and CloudMan.
Sloggett C; Goonasekera N; Afgan E
Bioinformatics; 2013 Jul; 29(13):1685-6. PubMed ID: 23630176
[TBL] [Abstract][Full Text] [Related]
20. Pharokka: a fast scalable bacteriophage annotation tool.
Bouras G; Nepal R; Houtak G; Psaltis AJ; Wormald PJ; Vreugde S
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36453861
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]