338 related articles for article (PubMed ID: 29662229)
1. Modulation of Hoogsteen dynamics on DNA recognition.
Xu Y; McSally J; Andricioaei I; Al-Hashimi HM
Nat Commun; 2018 Apr; 9(1):1473. PubMed ID: 29662229
[TBL] [Abstract][Full Text] [Related]
2. NMR investigation of Hoogsteen base pairing in quinoxaline antibiotic--DNA complexes: comparison of 2:1 echinomycin, triostin A and [N-MeCys3,N-MeCys7] TANDEM complexes with DNA oligonucleotides.
Addess KJ; Feigon J
Nucleic Acids Res; 1994 Dec; 22(24):5484-91. PubMed ID: 7816641
[TBL] [Abstract][Full Text] [Related]
3. Binding of quinomycin antibiotic UK-65,662 to DNA: 1H-n.m.r. studies of drug-induced changes in DNA conformation in complexes with d(ACGT)2 and d(GACGTC)2.
Searle MS
Biochem J; 1994 Dec; 304 ( Pt 3)(Pt 3):967-79. PubMed ID: 7818504
[TBL] [Abstract][Full Text] [Related]
4. NMR investigation of echinomycin binding to d(ACGTTAACGT)2: Hoogsteen versus Watson-Crick A.T base pairing between echinomycin binding sites.
Park JY; Choi BS
J Biochem; 1995 Nov; 118(5):989-95. PubMed ID: 8749317
[TBL] [Abstract][Full Text] [Related]
5. Direct evidence for (G)O6···H
Rangadurai A; Kremser J; Shi H; Kreutz C; Al-Hashimi HM
J Magn Reson; 2019 Nov; 308():106589. PubMed ID: 31539864
[TBL] [Abstract][Full Text] [Related]
6. Solution structure of a quinomycin bisintercalator-DNA complex.
Chen H; Patel DJ
J Mol Biol; 1995 Feb; 246(1):164-79. PubMed ID: 7853395
[TBL] [Abstract][Full Text] [Related]
7. Binding of echinomycin to d(GCGC)2 and d(CCGG)2: distinct stacking interactions dictate the sequence-dependent formation of Hoogsteen base pairs.
Gallego J; Luque FJ; Orozco M; Gago F
J Biomol Struct Dyn; 1994 Aug; 12(1):111-29. PubMed ID: 7848562
[TBL] [Abstract][Full Text] [Related]
8. Serendipitous SAD phasing of an echinomycin-(ACGTACGT)2 bisintercalation complex.
Cuesta-Seijo JA; Weiss MS; Sheldrick GM
Acta Crystallogr D Biol Crystallogr; 2006 Apr; 62(Pt 4):417-24. PubMed ID: 16552143
[TBL] [Abstract][Full Text] [Related]
9. Structures of complexes between echinomycin and duplex DNA.
Cuesta-Seijo JA; Sheldrick GM
Acta Crystallogr D Biol Crystallogr; 2005 Apr; 61(Pt 4):442-8. PubMed ID: 15805599
[TBL] [Abstract][Full Text] [Related]
10. Transient Hoogsteen base pairs in canonical duplex DNA.
Nikolova EN; Kim E; Wise AA; O'Brien PJ; Andricioaei I; Al-Hashimi HM
Nature; 2011 Feb; 470(7335):498-502. PubMed ID: 21270796
[TBL] [Abstract][Full Text] [Related]
11. Probing Watson-Crick and Hoogsteen base pairing in duplex DNA using dynamic nuclear polarization solid-state NMR spectroscopy.
Conroy DW; Xu Y; Shi H; Gonzalez Salguero N; Purusottam RN; Shannon MD; Al-Hashimi HM; Jaroniec CP
Proc Natl Acad Sci U S A; 2022 Jul; 119(30):e2200681119. PubMed ID: 35857870
[TBL] [Abstract][Full Text] [Related]
12. Unstable Hoogsteen base pairs adjacent to echinomycin binding sites within a DNA duplex.
Gilbert DE; van der Marel GA; van Boom JH; Feigon J
Proc Natl Acad Sci U S A; 1989 May; 86(9):3006-10. PubMed ID: 2717609
[TBL] [Abstract][Full Text] [Related]
13. NMR solution structure of a DNA-actinomycin D complex containing a non-hydrogen-bonding pair in the binding site.
Cravens SL; Navapanich AC; Geierstanger BH; Tahmassebi DC; Dwyer TJ
J Am Chem Soc; 2010 Dec; 132(49):17588-98. PubMed ID: 21090721
[TBL] [Abstract][Full Text] [Related]
14. Atomic structures of excited state A-T Hoogsteen base pairs in duplex DNA by combining NMR relaxation dispersion, mutagenesis, and chemical shift calculations.
Shi H; Clay MC; Rangadurai A; Sathyamoorthy B; Case DA; Al-Hashimi HM
J Biomol NMR; 2018 Apr; 70(4):229-244. PubMed ID: 29675775
[TBL] [Abstract][Full Text] [Related]
15. The first example of a Hoogsteen base-paired DNA duplex in dynamic equilibrium with a Watson-Crick base-paired duplex--a structural (NMR), kinetic and thermodynamic study.
Isaksson J; Zamaratski E; Maltseva TV; Agback P; Kumar A; Chattopadhyaya J
J Biomol Struct Dyn; 2001 Jun; 18(6):783-806. PubMed ID: 11444368
[TBL] [Abstract][Full Text] [Related]
16. A molecular dynamics study of the bis-intercalation complexes of echinomycin with d(ACGT)2 and d(TCGA)2: rationale for sequence-specific Hoogsteen base pairing.
Gallego J; Ortiz AR; Gago F
J Med Chem; 1993 May; 36(11):1548-61. PubMed ID: 8496924
[TBL] [Abstract][Full Text] [Related]
17. Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA.
Nikolova EN; Goh GB; Brooks CL; Al-Hashimi HM
J Am Chem Soc; 2013 May; 135(18):6766-9. PubMed ID: 23506098
[TBL] [Abstract][Full Text] [Related]
18. The DNA sequence at echinomycin binding sites determines the structural changes induced by drug binding: NMR studies of echinomycin binding to [d(ACGTACGT)]2 and [d(TCGATCGA)]2.
Gilbert DE; Feigon J
Biochemistry; 1991 Mar; 30(9):2483-94. PubMed ID: 2001374
[TBL] [Abstract][Full Text] [Related]
19. Looped out and perpendicular: deformation of Watson-Crick base pair associated with actinomycin D binding.
Chou SH; Chin KH; Chen FM
Proc Natl Acad Sci U S A; 2002 May; 99(10):6625-30. PubMed ID: 12011426
[TBL] [Abstract][Full Text] [Related]
20. Guanine to inosine substitution leads to large increases in the population of a transient G·C Hoogsteen base pair.
Nikolova EN; Stull F; Al-Hashimi HM
Biochemistry; 2014 Nov; 53(46):7145-7. PubMed ID: 25339065
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]