308 related articles for article (PubMed ID: 29672675)
21. Protein-protein interaction site prediction through combining local and global features with deep neural networks.
Zeng M; Zhang F; Wu FX; Li Y; Wang J; Li M
Bioinformatics; 2020 Feb; 36(4):1114-1120. PubMed ID: 31593229
[TBL] [Abstract][Full Text] [Related]
22. Improving protein disorder prediction by deep bidirectional long short-term memory recurrent neural networks.
Hanson J; Yang Y; Paliwal K; Zhou Y
Bioinformatics; 2017 Mar; 33(5):685-692. PubMed ID: 28011771
[TBL] [Abstract][Full Text] [Related]
23. Prediction of interresidue contacts with DeepMetaPSICOV in CASP13.
Kandathil SM; Greener JG; Jones DT
Proteins; 2019 Dec; 87(12):1092-1099. PubMed ID: 31298436
[TBL] [Abstract][Full Text] [Related]
24. Leveraging Sequential and Spatial Neighbors Information by Using CNNs Linked With GCNs for Paratope Prediction.
Lu S; Li Y; Wang F; Nan X; Zhang S
IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(1):68-74. PubMed ID: 34029193
[TBL] [Abstract][Full Text] [Related]
25. Improving prediction of protein secondary structure, backbone angles, solvent accessibility and contact numbers by using predicted contact maps and an ensemble of recurrent and residual convolutional neural networks.
Hanson J; Paliwal K; Litfin T; Yang Y; Zhou Y
Bioinformatics; 2019 Jul; 35(14):2403-2410. PubMed ID: 30535134
[TBL] [Abstract][Full Text] [Related]
26. Prediction of mutation effects using a deep temporal convolutional network.
Kim HY; Kim D
Bioinformatics; 2020 Apr; 36(7):2047-2052. PubMed ID: 31746978
[TBL] [Abstract][Full Text] [Related]
27. SAbPred: a structure-based antibody prediction server.
Dunbar J; Krawczyk K; Leem J; Marks C; Nowak J; Regep C; Georges G; Kelm S; Popovic B; Deane CM
Nucleic Acids Res; 2016 Jul; 44(W1):W474-8. PubMed ID: 27131379
[TBL] [Abstract][Full Text] [Related]
28. Multifaceted protein-protein interaction prediction based on Siamese residual RCNN.
Chen M; Ju CJ; Zhou G; Chen X; Zhang T; Chang KW; Zaniolo C; Wang W
Bioinformatics; 2019 Jul; 35(14):i305-i314. PubMed ID: 31510705
[TBL] [Abstract][Full Text] [Related]
29. DNN-Dom: predicting protein domain boundary from sequence alone by deep neural network.
Shi Q; Chen W; Huang S; Jin F; Dong Y; Wang Y; Xue Z
Bioinformatics; 2019 Dec; 35(24):5128-5136. PubMed ID: 31197306
[TBL] [Abstract][Full Text] [Related]
30. Compound-protein interaction prediction with end-to-end learning of neural networks for graphs and sequences.
Tsubaki M; Tomii K; Sese J
Bioinformatics; 2019 Jan; 35(2):309-318. PubMed ID: 29982330
[TBL] [Abstract][Full Text] [Related]
31. DeepACLSTM: deep asymmetric convolutional long short-term memory neural models for protein secondary structure prediction.
Guo Y; Li W; Wang B; Liu H; Zhou D
BMC Bioinformatics; 2019 Jun; 20(1):341. PubMed ID: 31208331
[TBL] [Abstract][Full Text] [Related]
32. SnugDock: paratope structural optimization during antibody-antigen docking compensates for errors in antibody homology models.
Sircar A; Gray JJ
PLoS Comput Biol; 2010 Jan; 6(1):e1000644. PubMed ID: 20098500
[TBL] [Abstract][Full Text] [Related]
33. DeepLoc: prediction of protein subcellular localization using deep learning.
Almagro Armenteros JJ; Sønderby CK; Sønderby SK; Nielsen H; Winther O
Bioinformatics; 2017 Nov; 33(21):3387-3395. PubMed ID: 29036616
[TBL] [Abstract][Full Text] [Related]
34. LncADeep: an ab initio lncRNA identification and functional annotation tool based on deep learning.
Yang C; Yang L; Zhou M; Xie H; Zhang C; Wang MD; Zhu H
Bioinformatics; 2018 Nov; 34(22):3825-3834. PubMed ID: 29850816
[TBL] [Abstract][Full Text] [Related]
35. An introduction to deep learning on biological sequence data: examples and solutions.
Jurtz VI; Johansen AR; Nielsen M; Almagro Armenteros JJ; Nielsen H; Sønderby CK; Winther O; Sønderby SK
Bioinformatics; 2017 Nov; 33(22):3685-3690. PubMed ID: 28961695
[TBL] [Abstract][Full Text] [Related]
36. DeepT3: deep convolutional neural networks accurately identify Gram-negative bacterial type III secreted effectors using the N-terminal sequence.
Xue L; Tang B; Chen W; Luo J
Bioinformatics; 2019 Jun; 35(12):2051-2057. PubMed ID: 30407530
[TBL] [Abstract][Full Text] [Related]
37. pysster: classification of biological sequences by learning sequence and structure motifs with convolutional neural networks.
Budach S; Marsico A
Bioinformatics; 2018 Sep; 34(17):3035-3037. PubMed ID: 29659719
[TBL] [Abstract][Full Text] [Related]
38. DeepDTA: deep drug-target binding affinity prediction.
Öztürk H; Özgür A; Ozkirimli E
Bioinformatics; 2018 Sep; 34(17):i821-i829. PubMed ID: 30423097
[TBL] [Abstract][Full Text] [Related]
39. Off-target predictions in CRISPR-Cas9 gene editing using deep learning.
Lin J; Wong KC
Bioinformatics; 2018 Sep; 34(17):i656-i663. PubMed ID: 30423072
[TBL] [Abstract][Full Text] [Related]
40. Deep learning methods for protein torsion angle prediction.
Li H; Hou J; Adhikari B; Lyu Q; Cheng J
BMC Bioinformatics; 2017 Sep; 18(1):417. PubMed ID: 28923002
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
