543 related articles for article (PubMed ID: 29692413)
1. Structural variation in the 3D genome.
Spielmann M; Lupiáñez DG; Mundlos S
Nat Rev Genet; 2018 Jul; 19(7):453-467. PubMed ID: 29692413
[TBL] [Abstract][Full Text] [Related]
2. Disruption of regulatory domains and novel transcripts as disease-causing mechanisms.
Allou L; Mundlos S
Bioessays; 2023 Oct; 45(10):e2300010. PubMed ID: 37381881
[TBL] [Abstract][Full Text] [Related]
3. SVExpress: identifying gene features altered recurrently in expression with nearby structural variant breakpoints.
Zhang Y; Chen F; Creighton CJ
BMC Bioinformatics; 2021 Mar; 22(1):135. PubMed ID: 33743584
[TBL] [Abstract][Full Text] [Related]
4. Disruption of topologically associating domains by structural variations in tetraploid cottons.
Long Y; Liu Z; Wang P; Yang H; Wang Y; Zhang S; Zhang X; Wang M
Genomics; 2021 Sep; 113(5):3405-3414. PubMed ID: 34311045
[TBL] [Abstract][Full Text] [Related]
5. Prioritization of genes driving congenital phenotypes of patients with de novo genomic structural variants.
Middelkamp S; Vlaar JM; Giltay J; Korzelius J; Besselink N; Boymans S; Janssen R; de la Fonteijne L; van Binsbergen E; van Roosmalen MJ; Hochstenbach R; Giachino D; Talkowski ME; Kloosterman WP; Cuppen E
Genome Med; 2019 Dec; 11(1):79. PubMed ID: 31801603
[TBL] [Abstract][Full Text] [Related]
6. Somatic structural variant formation is guided by and influences genome architecture.
Sidiropoulos N; Mardin BR; Rodríguez-González FG; Bochkov ID; Garg S; Stütz AM; Korbel JO; Aiden EL; Weischenfeldt J
Genome Res; 2022 Apr; 32(4):643-655. PubMed ID: 35177558
[TBL] [Abstract][Full Text] [Related]
7. When 3D genome changes cause disease: the impact of structural variations in congenital disease and cancer.
Weischenfeldt J; Ibrahim DM
Curr Opin Genet Dev; 2023 Jun; 80():102048. PubMed ID: 37156210
[TBL] [Abstract][Full Text] [Related]
8. Evolutionary stability of topologically associating domains is associated with conserved gene regulation.
Krefting J; Andrade-Navarro MA; Ibn-Salem J
BMC Biol; 2018 Aug; 16(1):87. PubMed ID: 30086749
[TBL] [Abstract][Full Text] [Related]
9. Dynamic Interplay between Structural Variations and 3D Genome Organization in Pancreatic Cancer.
Du Y; Gu Z; Li Z; Yuan Z; Zhao Y; Zheng X; Bo X; Chen H; Wang C
Adv Sci (Weinh); 2022 Jun; 9(18):e2200818. PubMed ID: 35570408
[TBL] [Abstract][Full Text] [Related]
10. Chromosome conformation capture technologies as tools to detect structural variations and their repercussion in chromatin 3D configuration.
Stephenson-Gussinye A; Furlan-Magaril M
Front Cell Dev Biol; 2023; 11():1219968. PubMed ID: 37457299
[TBL] [Abstract][Full Text] [Related]
11. The role of 3D genome organization in development and cell differentiation.
Zheng H; Xie W
Nat Rev Mol Cell Biol; 2019 Sep; 20(9):535-550. PubMed ID: 31197269
[TBL] [Abstract][Full Text] [Related]
12. TADeus2: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure.
Poszewiecka B; Pienkowski VM; Nowosad K; Robin JD; Gogolewski K; Gambin A
Nucleic Acids Res; 2022 Jul; 50(W1):W744-W752. PubMed ID: 35524567
[TBL] [Abstract][Full Text] [Related]
13. Polymer physics predicts the effects of structural variants on chromatin architecture.
Bianco S; Lupiáñez DG; Chiariello AM; Annunziatella C; Kraft K; Schöpflin R; Wittler L; Andrey G; Vingron M; Pombo A; Mundlos S; Nicodemi M
Nat Genet; 2018 May; 50(5):662-667. PubMed ID: 29662163
[TBL] [Abstract][Full Text] [Related]
14. Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer.
Akdemir KC; Le VT; Chandran S; Li Y; Verhaak RG; Beroukhim R; Campbell PJ; Chin L; Dixon JR; Futreal PA; ;
Nat Genet; 2020 Mar; 52(3):294-305. PubMed ID: 32024999
[TBL] [Abstract][Full Text] [Related]
15. SV-HotSpot: detection and visualization of hotspots targeted by structural variants associated with gene expression.
Eteleeb AM; Quigley DA; Zhao SG; Pham D; Yang R; Dehm SM; Luo J; Feng FY; Dang HX; Maher CA
Sci Rep; 2020 Sep; 10(1):15890. PubMed ID: 32985524
[TBL] [Abstract][Full Text] [Related]
16. Fine-Scale Characterization of Genomic Structural Variation in the Human Genome Reveals Adaptive and Biomedically Relevant Hotspots.
Lin YL; Gokcumen O
Genome Biol Evol; 2019 Apr; 11(4):1136-1151. PubMed ID: 30887040
[TBL] [Abstract][Full Text] [Related]
17. The role of 3D chromatin domains in gene regulation: a multi-facetted view on genome organization.
Ibrahim DM; Mundlos S
Curr Opin Genet Dev; 2020 Apr; 61():1-8. PubMed ID: 32199341
[TBL] [Abstract][Full Text] [Related]
18. Disruption of the 3D cancer genome blueprint.
Achinger-Kawecka J; Clark SJ
Epigenomics; 2017 Jan; 9(1):47-55. PubMed ID: 27936932
[TBL] [Abstract][Full Text] [Related]
19. Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers.
Alaei-Mahabadi B; Bhadury J; Karlsson JW; Nilsson JA; Larsson E
Proc Natl Acad Sci U S A; 2016 Nov; 113(48):13768-13773. PubMed ID: 27856756
[TBL] [Abstract][Full Text] [Related]
20. Chromatin three-dimensional interactions mediate genetic effects on gene expression.
Delaneau O; Zazhytska M; Borel C; Giannuzzi G; Rey G; Howald C; Kumar S; Ongen H; Popadin K; Marbach D; Ambrosini G; Bielser D; Hacker D; Romano L; Ribaux P; Wiederkehr M; Falconnet E; Bucher P; Bergmann S; Antonarakis SE; Reymond A; Dermitzakis ET
Science; 2019 May; 364(6439):. PubMed ID: 31048460
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]