BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

543 related articles for article (PubMed ID: 29692413)

  • 1. Structural variation in the 3D genome.
    Spielmann M; Lupiáñez DG; Mundlos S
    Nat Rev Genet; 2018 Jul; 19(7):453-467. PubMed ID: 29692413
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Disruption of regulatory domains and novel transcripts as disease-causing mechanisms.
    Allou L; Mundlos S
    Bioessays; 2023 Oct; 45(10):e2300010. PubMed ID: 37381881
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SVExpress: identifying gene features altered recurrently in expression with nearby structural variant breakpoints.
    Zhang Y; Chen F; Creighton CJ
    BMC Bioinformatics; 2021 Mar; 22(1):135. PubMed ID: 33743584
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Disruption of topologically associating domains by structural variations in tetraploid cottons.
    Long Y; Liu Z; Wang P; Yang H; Wang Y; Zhang S; Zhang X; Wang M
    Genomics; 2021 Sep; 113(5):3405-3414. PubMed ID: 34311045
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Prioritization of genes driving congenital phenotypes of patients with de novo genomic structural variants.
    Middelkamp S; Vlaar JM; Giltay J; Korzelius J; Besselink N; Boymans S; Janssen R; de la Fonteijne L; van Binsbergen E; van Roosmalen MJ; Hochstenbach R; Giachino D; Talkowski ME; Kloosterman WP; Cuppen E
    Genome Med; 2019 Dec; 11(1):79. PubMed ID: 31801603
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Somatic structural variant formation is guided by and influences genome architecture.
    Sidiropoulos N; Mardin BR; Rodríguez-González FG; Bochkov ID; Garg S; Stütz AM; Korbel JO; Aiden EL; Weischenfeldt J
    Genome Res; 2022 Apr; 32(4):643-655. PubMed ID: 35177558
    [TBL] [Abstract][Full Text] [Related]  

  • 7. When 3D genome changes cause disease: the impact of structural variations in congenital disease and cancer.
    Weischenfeldt J; Ibrahim DM
    Curr Opin Genet Dev; 2023 Jun; 80():102048. PubMed ID: 37156210
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Evolutionary stability of topologically associating domains is associated with conserved gene regulation.
    Krefting J; Andrade-Navarro MA; Ibn-Salem J
    BMC Biol; 2018 Aug; 16(1):87. PubMed ID: 30086749
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dynamic Interplay between Structural Variations and 3D Genome Organization in Pancreatic Cancer.
    Du Y; Gu Z; Li Z; Yuan Z; Zhao Y; Zheng X; Bo X; Chen H; Wang C
    Adv Sci (Weinh); 2022 Jun; 9(18):e2200818. PubMed ID: 35570408
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Chromosome conformation capture technologies as tools to detect structural variations and their repercussion in chromatin 3D configuration.
    Stephenson-Gussinye A; Furlan-Magaril M
    Front Cell Dev Biol; 2023; 11():1219968. PubMed ID: 37457299
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The role of 3D genome organization in development and cell differentiation.
    Zheng H; Xie W
    Nat Rev Mol Cell Biol; 2019 Sep; 20(9):535-550. PubMed ID: 31197269
    [TBL] [Abstract][Full Text] [Related]  

  • 12. TADeus2: a web server facilitating the clinical diagnosis by pathogenicity assessment of structural variations disarranging 3D chromatin structure.
    Poszewiecka B; Pienkowski VM; Nowosad K; Robin JD; Gogolewski K; Gambin A
    Nucleic Acids Res; 2022 Jul; 50(W1):W744-W752. PubMed ID: 35524567
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Polymer physics predicts the effects of structural variants on chromatin architecture.
    Bianco S; Lupiáñez DG; Chiariello AM; Annunziatella C; Kraft K; Schöpflin R; Wittler L; Andrey G; Vingron M; Pombo A; Mundlos S; Nicodemi M
    Nat Genet; 2018 May; 50(5):662-667. PubMed ID: 29662163
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer.
    Akdemir KC; Le VT; Chandran S; Li Y; Verhaak RG; Beroukhim R; Campbell PJ; Chin L; Dixon JR; Futreal PA; ;
    Nat Genet; 2020 Mar; 52(3):294-305. PubMed ID: 32024999
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SV-HotSpot: detection and visualization of hotspots targeted by structural variants associated with gene expression.
    Eteleeb AM; Quigley DA; Zhao SG; Pham D; Yang R; Dehm SM; Luo J; Feng FY; Dang HX; Maher CA
    Sci Rep; 2020 Sep; 10(1):15890. PubMed ID: 32985524
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Fine-Scale Characterization of Genomic Structural Variation in the Human Genome Reveals Adaptive and Biomedically Relevant Hotspots.
    Lin YL; Gokcumen O
    Genome Biol Evol; 2019 Apr; 11(4):1136-1151. PubMed ID: 30887040
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The role of 3D chromatin domains in gene regulation: a multi-facetted view on genome organization.
    Ibrahim DM; Mundlos S
    Curr Opin Genet Dev; 2020 Apr; 61():1-8. PubMed ID: 32199341
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Disruption of the 3D cancer genome blueprint.
    Achinger-Kawecka J; Clark SJ
    Epigenomics; 2017 Jan; 9(1):47-55. PubMed ID: 27936932
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers.
    Alaei-Mahabadi B; Bhadury J; Karlsson JW; Nilsson JA; Larsson E
    Proc Natl Acad Sci U S A; 2016 Nov; 113(48):13768-13773. PubMed ID: 27856756
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Chromatin three-dimensional interactions mediate genetic effects on gene expression.
    Delaneau O; Zazhytska M; Borel C; Giannuzzi G; Rey G; Howald C; Kumar S; Ongen H; Popadin K; Marbach D; Ambrosini G; Bielser D; Hacker D; Romano L; Ribaux P; Wiederkehr M; Falconnet E; Bucher P; Bergmann S; Antonarakis SE; Reymond A; Dermitzakis ET
    Science; 2019 May; 364(6439):. PubMed ID: 31048460
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 28.