These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 29703150)

  • 1. OMGene: mutual improvement of gene models through optimisation of evolutionary conservation.
    Dunne MP; Kelly S
    BMC Genomics; 2018 Apr; 19(1):307. PubMed ID: 29703150
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Multi-Genome Annotation with AUGUSTUS.
    Nachtweide S; Stanke M
    Methods Mol Biol; 2019; 1962():139-160. PubMed ID: 31020558
    [TBL] [Abstract][Full Text] [Related]  

  • 3. CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts.
    Testa AC; Hane JK; Ellwood SR; Oliver RP
    BMC Genomics; 2015 Mar; 16(1):170. PubMed ID: 25887563
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A robust (re-)annotation approach to generate unbiased mapping references for RNA-seq-based analyses of differential expression across closely related species.
    Torres-Oliva M; Almudi I; McGregor AP; Posnien N
    BMC Genomics; 2016 May; 17():392. PubMed ID: 27220689
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi.
    Keilwagen J; Hartung F; Paulini M; Twardziok SO; Grau J
    BMC Bioinformatics; 2018 May; 19(1):189. PubMed ID: 29843602
    [TBL] [Abstract][Full Text] [Related]  

  • 6. OrthoFiller: utilising data from multiple species to improve the completeness of genome annotations.
    Dunne MP; Kelly S
    BMC Genomics; 2017 May; 18(1):390. PubMed ID: 28521726
    [TBL] [Abstract][Full Text] [Related]  

  • 7. AGOUTI: improving genome assembly and annotation using transcriptome data.
    Zhang SV; Zhuo L; Hahn MW
    Gigascience; 2016 Jul; 5(1):31. PubMed ID: 27435057
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Ensembl comparative genomics resources.
    Herrero J; Muffato M; Beal K; Fitzgerald S; Gordon L; Pignatelli M; Vilella AJ; Searle SM; Amode R; Brent S; Spooner W; Kulesha E; Yates A; Flicek P
    Database (Oxford); 2016; 2016():. PubMed ID: 26896847
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups.
    Jammali S; Aguilar JD; Kuitche E; Ouangraoua A
    BMC Bioinformatics; 2019 Mar; 20(Suppl 3):133. PubMed ID: 30925859
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A high-quality annotated transcriptome of swine peripheral blood.
    Liu H; Smith TPL; Nonneman DJ; Dekkers JCM; Tuggle CK
    BMC Genomics; 2017 Jun; 18(1):479. PubMed ID: 28646867
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Characterizing and annotating the genome using RNA-seq data.
    Chen G; Shi T; Shi L
    Sci China Life Sci; 2017 Feb; 60(2):116-125. PubMed ID: 27294835
    [TBL] [Abstract][Full Text] [Related]  

  • 12. GASS: genome structural annotation for Eukaryotes based on species similarity.
    Wang Y; Chen L; Song N; Lei X
    BMC Genomics; 2015 Mar; 16(1):150. PubMed ID: 25764973
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Automated alignment-based curation of gene models in filamentous fungi.
    van der Burgt A; Severing E; Collemare J; de Wit PJ
    BMC Bioinformatics; 2014 Jan; 15():19. PubMed ID: 24433567
    [TBL] [Abstract][Full Text] [Related]  

  • 14. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Transcriptome profile of a bovine respiratory disease pathogen: Mannheimia haemolytica PHL213.
    Reddy JS; Kumar R; Watt JM; Lawrence ML; Burgess SC; Nanduri B
    BMC Bioinformatics; 2012; 13 Suppl 15(Suppl 15):S4. PubMed ID: 23046475
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models.
    Reid I; O'Toole N; Zabaneh O; Nourzadeh R; Dahdouli M; Abdellateef M; Gordon PM; Soh J; Butler G; Sensen CW; Tsang A
    BMC Bioinformatics; 2014 Jul; 15():229. PubMed ID: 24980894
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis.
    Tu Q; Cameron RA; Worley KC; Gibbs RA; Davidson EH
    Genome Res; 2012 Oct; 22(10):2079-87. PubMed ID: 22709795
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RNA-seq analysis of the C. briggsae transcriptome.
    Uyar B; Chu JS; Vergara IA; Chua SY; Jones MR; Wong T; Baillie DL; Chen N
    Genome Res; 2012 Aug; 22(8):1567-80. PubMed ID: 22772596
    [TBL] [Abstract][Full Text] [Related]  

  • 19. SeqTools: visual tools for manual analysis of sequence alignments.
    Barson G; Griffiths E
    BMC Res Notes; 2016 Jan; 9():39. PubMed ID: 26801397
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 9.