These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
4. Adaptive tracking algorithm for trajectory analysis of cells and layer-by-layer assessment of motility dynamics. Qureshi MH; Ozlu N; Bayraktar H Comput Biol Med; 2022 Nov; 150():106193. PubMed ID: 37859286 [TBL] [Abstract][Full Text] [Related]
5. Migration and interaction tracking for quantitative analysis of phagocyte-pathogen confrontation assays. Brandes S; Dietrich S; Hünniger K; Kurzai O; Figge MT Med Image Anal; 2017 Feb; 36():172-183. PubMed ID: 27940225 [TBL] [Abstract][Full Text] [Related]
6. Employing temporal information for cell segmentation using max-flow/min-cut in phase-contrast video microscopy. Massoudi A; Sowmya A; Mele K; Semenovich D Annu Int Conf IEEE Eng Med Biol Soc; 2011; 2011():5985-8. PubMed ID: 22255703 [TBL] [Abstract][Full Text] [Related]
7. A benchmark for comparison of cell tracking algorithms. Maška M; Ulman V; Svoboda D; Matula P; Matula P; Ederra C; Urbiola A; España T; Venkatesan S; Balak DM; Karas P; Bolcková T; Streitová M; Carthel C; Coraluppi S; Harder N; Rohr K; Magnusson KE; Jaldén J; Blau HM; Dzyubachyk O; Křížek P; Hagen GM; Pastor-Escuredo D; Jimenez-Carretero D; Ledesma-Carbayo MJ; Muñoz-Barrutia A; Meijering E; Kozubek M; Ortiz-de-Solorzano C Bioinformatics; 2014 Jun; 30(11):1609-17. PubMed ID: 24526711 [TBL] [Abstract][Full Text] [Related]
8. Coupled minimum-cost flow cell tracking for high-throughput quantitative analysis. Padfield D; Rittscher J; Roysam B Med Image Anal; 2011 Aug; 15(4):650-68. PubMed ID: 20864383 [TBL] [Abstract][Full Text] [Related]
9. Segmenting and tracking cell instances with cosine embeddings and recurrent hourglass networks. Payer C; Štern D; Feiner M; Bischof H; Urschler M Med Image Anal; 2019 Oct; 57():106-119. PubMed ID: 31299493 [TBL] [Abstract][Full Text] [Related]
10. DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning. Lugagne JB; Lin H; Dunlop MJ PLoS Comput Biol; 2020 Apr; 16(4):e1007673. PubMed ID: 32282792 [TBL] [Abstract][Full Text] [Related]
12. A robust algorithm for segmenting and tracking clustered cells in time-lapse fluorescent microscopy. Tarnawski W; Kurtcuoglu V; Lorek P; Bodych M; Rotter J; Muszkieta M; Piwowar Ł; Poulikakos D; Majkowski M; Ferrari A IEEE J Biomed Health Inform; 2013 Jul; 17(4):862-9. PubMed ID: 25055315 [TBL] [Abstract][Full Text] [Related]
13. Quantitative comparison of multiframe data association techniques for particle tracking in time-lapse fluorescence microscopy. Smal I; Meijering E Med Image Anal; 2015 Aug; 24(1):163-189. PubMed ID: 26176413 [TBL] [Abstract][Full Text] [Related]
14. Instant processing of large-scale image data with FACT, a real-time cell segmentation and tracking algorithm. Chou TC; You L; Beerens C; Feller KJ; Storteboom J; Chien MP Cell Rep Methods; 2023 Nov; 3(11):100636. PubMed ID: 37963463 [TBL] [Abstract][Full Text] [Related]
15. Associating approximate paths and temporal sequences of noisy detections: Application to the recovery of spatio-temporal cancer cell trajectories. Dorfer M; Kazmar T; Šmíd M; Sing S; Kneißl J; Keller S; Debeir O; Luber B; Mattes J Med Image Anal; 2016 Jan; 27():72-83. PubMed ID: 25987193 [TBL] [Abstract][Full Text] [Related]
16. Context aware spatio-temporal cell tracking in densely packed multilayer tissues. Chakraborty A; Roy-Chowdhury AK Med Image Anal; 2015 Jan; 19(1):149-63. PubMed ID: 25461334 [TBL] [Abstract][Full Text] [Related]
17. An objective comparison of cell-tracking algorithms. Ulman V; Maška M; Magnusson KEG; Ronneberger O; Haubold C; Harder N; Matula P; Matula P; Svoboda D; Radojevic M; Smal I; Rohr K; Jaldén J; Blau HM; Dzyubachyk O; Lelieveldt B; Xiao P; Li Y; Cho SY; Dufour AC; Olivo-Marin JC; Reyes-Aldasoro CC; Solis-Lemus JA; Bensch R; Brox T; Stegmaier J; Mikut R; Wolf S; Hamprecht FA; Esteves T; Quelhas P; Demirel Ö; Malmström L; Jug F; Tomancak P; Meijering E; Muñoz-Barrutia A; Kozubek M; Ortiz-de-Solorzano C Nat Methods; 2017 Dec; 14(12):1141-1152. PubMed ID: 29083403 [TBL] [Abstract][Full Text] [Related]
18. A Cell Segmentation/Tracking Tool Based on Machine Learning. Deter HS; Dies M; Cameron CC; Butzin NC; Buceta J Methods Mol Biol; 2019; 2040():399-422. PubMed ID: 31432490 [TBL] [Abstract][Full Text] [Related]
19. A fully-automated, robust, and versatile algorithm for long-term budding yeast segmentation and tracking. Wood NE; Doncic A PLoS One; 2019; 14(3):e0206395. PubMed ID: 30917124 [TBL] [Abstract][Full Text] [Related]