283 related articles for article (PubMed ID: 29755427)
1. 16S rRNA Gene Sequencing for Deciphering the Colorectal Cancer Gut Microbiome: Current Protocols and Workflows.
Osman MA; Neoh HM; Ab Mutalib NS; Chin SF; Jamal R
Front Microbiol; 2018; 9():767. PubMed ID: 29755427
[TBL] [Abstract][Full Text] [Related]
2. Improving the standards for gut microbiome analysis of fecal samples: insights from the field biology of Japanese macaques on Yakushima Island.
Hayakawa T; Sawada A; Tanabe AS; Fukuda S; Kishida T; Kurihara Y; Matsushima K; Liu J; Akomo-Okoue EF; Gravena W; Kashima M; Suzuki M; Kadowaki K; Suzumura T; Inoue E; Sugiura H; Hanya G; Agata K
Primates; 2018 Sep; 59(5):423-436. PubMed ID: 29942984
[TBL] [Abstract][Full Text] [Related]
3. A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome.
Allali I; Arnold JW; Roach J; Cadenas MB; Butz N; Hassan HM; Koci M; Ballou A; Mendoza M; Ali R; Azcarate-Peril MA
BMC Microbiol; 2017 Sep; 17(1):194. PubMed ID: 28903732
[TBL] [Abstract][Full Text] [Related]
4. Can Targeting Non-Contiguous V-Regions With Paired-End Sequencing Improve 16S rRNA-Based Taxonomic Resolution of Microbiomes?: An
Pinna NK; Dutta A; Monzoorul Haque M; Mande SS
Front Genet; 2019; 10():653. PubMed ID: 31354793
[No Abstract] [Full Text] [Related]
5. Quantitative Assessment of Shotgun Metagenomics and 16S rDNA Amplicon Sequencing in the Study of Human Gut Microbiome.
Laudadio I; Fulci V; Palone F; Stronati L; Cucchiara S; Carissimi C
OMICS; 2018 Apr; 22(4):248-254. PubMed ID: 29652573
[TBL] [Abstract][Full Text] [Related]
6. Integrated microbiome and metabolome analysis reveals a novel interplay between commensal bacteria and metabolites in colorectal cancer.
Yang Y; Misra BB; Liang L; Bi D; Weng W; Wu W; Cai S; Qin H; Goel A; Li X; Ma Y
Theranostics; 2019; 9(14):4101-4114. PubMed ID: 31281534
[No Abstract] [Full Text] [Related]
7. Functional Changes in the Gut Microbiome Contribute to Transforming Growth Factor β-Deficient Colon Cancer.
Daniel SG; Ball CL; Besselsen DG; Doetschman T; Hurwitz BL
mSystems; 2017; 2(5):. PubMed ID: 28951889
[TBL] [Abstract][Full Text] [Related]
8. Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling.
Fuks G; Elgart M; Amir A; Zeisel A; Turnbaugh PJ; Soen Y; Shental N
Microbiome; 2018 Jan; 6(1):17. PubMed ID: 29373999
[TBL] [Abstract][Full Text] [Related]
9. Altered Fecal Small RNA Profiles in Colorectal Cancer Reflect Gut Microbiome Composition in Stool Samples.
Tarallo S; Ferrero G; Gallo G; Francavilla A; Clerico G; Realis Luc A; Manghi P; Thomas AM; Vineis P; Segata N; Pardini B; Naccarati A; Cordero F
mSystems; 2019 Sep; 4(5):. PubMed ID: 31530647
[TBL] [Abstract][Full Text] [Related]
10. Long-term follow-up of colorectal cancer screening attendees identifies differences in
Bucher-Johannessen C; Birkeland EE; Vinberg E; Bemanian V; Hoff G; Berstad P; Rounge TB
Front Oncol; 2023; 13():1183039. PubMed ID: 37182146
[TBL] [Abstract][Full Text] [Related]
11. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
[TBL] [Abstract][Full Text] [Related]
12. Considerations For Optimizing Microbiome Analysis Using a Marker Gene.
de la Cuesta-Zuluaga J; Escobar JS
Front Nutr; 2016; 3():26. PubMed ID: 27551678
[TBL] [Abstract][Full Text] [Related]
13. Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies.
Ammer-Herrmenau C; Pfisterer N; van den Berg T; Gavrilova I; Amanzada A; Singh SK; Khalil A; Alili R; Belda E; Clement K; Abd El Wahed A; Gady EE; Haubrock M; Beißbarth T; Ellenrieder V; Neesse A
mSystems; 2021 Aug; 6(4):e0075021. PubMed ID: 34427527
[TBL] [Abstract][Full Text] [Related]
14. High-resolution bacterial 16S rRNA gene profile meta-analysis and biofilm status reveal common colorectal cancer consortia.
Drewes JL; White JR; Dejea CM; Fathi P; Iyadorai T; Vadivelu J; Roslani AC; Wick EC; Mongodin EF; Loke MF; Thulasi K; Gan HM; Goh KL; Chong HY; Kumar S; Wanyiri JW; Sears CL
NPJ Biofilms Microbiomes; 2017; 3():34. PubMed ID: 29214046
[TBL] [Abstract][Full Text] [Related]
15. Meta-analysis of 16S rRNA Microbial Data Identified Distinctive and Predictive Microbiota Dysbiosis in Colorectal Carcinoma Adjacent Tissue.
Mo Z; Huang P; Yang C; Xiao S; Zhang G; Ling F; Li L
mSystems; 2020 Apr; 5(2):. PubMed ID: 32291348
[TBL] [Abstract][Full Text] [Related]
16. Colorectal Tumour Mucosa Microbiome Is Enriched in Oral Pathogens and Defines Three Subtypes That Correlate with Markers of Tumour Progression.
Zwinsová B; Petrov VA; Hrivňáková M; Smatana S; Micenková L; Kazdová N; Popovici V; Hrstka R; Šefr R; Bencsiková B; Zdražilová-Dubská L; Brychtová V; Nenutil R; Vídeňská P; Budinská E
Cancers (Basel); 2021 Sep; 13(19):. PubMed ID: 34638284
[TBL] [Abstract][Full Text] [Related]
17. Near full-length 16S rRNA gene next-generation sequencing revealed Asaia as a common midgut bacterium of wild and domesticated Queensland fruit fly larvae.
Deutscher AT; Burke CM; Darling AE; Riegler M; Reynolds OL; Chapman TA
Microbiome; 2018 May; 6(1):85. PubMed ID: 29729663
[TBL] [Abstract][Full Text] [Related]
18. Fecal Bacteria as Non-Invasive Biomarkers for Colorectal Adenocarcinoma.
Yuan B; Ma B; Yu J; Meng Q; Du T; Li H; Zhu Y; Sun Z; Ma S; Song C
Front Oncol; 2021; 11():664321. PubMed ID: 34447694
[TBL] [Abstract][Full Text] [Related]
19. Guided Protocol for Fecal Microbial Characterization by 16S rRNA-Amplicon Sequencing.
Di Segni A; Braun T; BenShoshan M; Farage Barhom S; Glick Saar E; Cesarkas K; Squires JE; Keller N; Haberman Y
J Vis Exp; 2018 Mar; (133):. PubMed ID: 29608151
[TBL] [Abstract][Full Text] [Related]
20. MinION Sequencing of colorectal cancer tumour microbiomes-A comparison with amplicon-based and RNA-Sequencing.
Taylor WS; Pearson J; Miller A; Schmeier S; Frizelle FA; Purcell RV
PLoS One; 2020; 15(5):e0233170. PubMed ID: 32433701
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]