BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

357 related articles for article (PubMed ID: 29788428)

  • 1. PUF60-activated exons uncover altered 3' splice-site selection by germline missense mutations in a single RRM.
    Královicová J; Ševcíková I; Stejskalová E; Obuca M; Hiller M; Stanek D; Vorechovský I
    Nucleic Acids Res; 2018 Jul; 46(12):6166-6187. PubMed ID: 29788428
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Cancer-Associated Substitutions in RNA Recognition Motifs of PUF60 and U2AF65 Reveal Residues Required for Correct Folding and 3' Splice-Site Selection.
    Kralovicova J; Borovska I; Kubickova M; Lukavsky PJ; Vorechovsky I
    Cancers (Basel); 2020 Jul; 12(7):. PubMed ID: 32664474
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Identification of U2AF(35)-dependent exons by RNA-Seq reveals a link between 3' splice-site organization and activity of U2AF-related proteins.
    Kralovicova J; Knut M; Cross NC; Vorechovsky I
    Nucleic Acids Res; 2015 Apr; 43(7):3747-63. PubMed ID: 25779042
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Splicing Enhancers at Intron-Exon Borders Participate in Acceptor Splice Sites Recognition.
    Kováčová T; Souček P; Hujová P; Freiberger T; Grodecká L
    Int J Mol Sci; 2020 Sep; 21(18):. PubMed ID: 32911621
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Alternative splicing of U2AF1 reveals a shared repression mechanism for duplicated exons.
    Kralovicova J; Vorechovsky I
    Nucleic Acids Res; 2017 Jan; 45(1):417-434. PubMed ID: 27566151
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
    Hsiao HT; Crichlow GV; Murphy JW; Folta-Stogniew EJ; Lolis EJ; Braddock DT
    PLoS One; 2020; 15(11):e0242725. PubMed ID: 33253191
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Protein 4.1R Exon 16 3' Splice Site Activation Requires Coordination among TIA1, Pcbp1, and RBM39 during Terminal Erythropoiesis.
    Huang SC; Zhang HS; Yu B; McMahon E; Nguyen DT; Yu FH; Ou AC; Ou JP; Benz EJ
    Mol Cell Biol; 2017 May; 37(9):. PubMed ID: 28193846
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Binding of hnRNP H and U2AF65 to respective G-codes and a poly-uridine tract collaborate in the N50-5'ss selection of the REST N exon in H69 cells.
    Ortuño-Pineda C; Galindo-Rosales JM; Calderón-Salinas JV; Villegas-Sepúlveda N; Saucedo-Cárdenas O; De Nova-Ocampo M; Valdés J
    PLoS One; 2012; 7(7):e40315. PubMed ID: 22792276
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Reconstitution of exon-bridging activity with purified U2AF and U1 snRNP components.
    Cunningham TP; Hagan JP; Grabowski PJ
    Nucleic Acids Symp Ser; 1995; (33):218-9. PubMed ID: 8643375
    [TBL] [Abstract][Full Text] [Related]  

  • 10. HNRNPA1 promotes recognition of splice site decoys by U2AF2 in vivo.
    Howard JM; Lin H; Wallace AJ; Kim G; Draper JM; Haeussler M; Katzman S; Toloue M; Liu Y; Sanford JR
    Genome Res; 2018 May; 28(5):689-698. PubMed ID: 29650551
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing.
    Day IS; Golovkin M; Palusa SG; Link A; Ali GS; Thomas J; Richardson DN; Reddy AS
    Plant J; 2012 Sep; 71(6):936-47. PubMed ID: 22563826
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Biased exon/intron distribution of cryptic and de novo 3' splice sites.
    Královicová J; Christensen MB; Vorechovský I
    Nucleic Acids Res; 2005; 33(15):4882-98. PubMed ID: 16141195
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors.
    Misra A; Ou J; Zhu LJ; Green MR
    Mol Cell; 2015 Jun; 58(5):819-31. PubMed ID: 25921069
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Impact of acceptor splice site NAGTAG motif on exon recognition.
    Hujová P; Grodecká L; Souček P; Freiberger T
    Mol Biol Rep; 2019 Jun; 46(3):2877-2884. PubMed ID: 30840204
    [TBL] [Abstract][Full Text] [Related]  

  • 15. U2AF
    Tari M; Manceau V; de Matha Salone J; Kobayashi A; Pastré D; Maucuer A
    EMBO Rep; 2019 Aug; 20(8):e47604. PubMed ID: 31271494
    [TBL] [Abstract][Full Text] [Related]  

  • 16. U1 snRNP targets an essential splicing factor, U2AF65, to the 3' splice site by a network of interactions spanning the exon.
    Hoffman BE; Grabowski PJ
    Genes Dev; 1992 Dec; 6(12B):2554-68. PubMed ID: 1285125
    [TBL] [Abstract][Full Text] [Related]  

  • 17. αCP binding to a cytosine-rich subset of polypyrimidine tracts drives a novel pathway of cassette exon splicing in the mammalian transcriptome.
    Ji X; Park JW; Bahrami-Samani E; Lin L; Duncan-Lewis C; Pherribo G; Xing Y; Liebhaber SA
    Nucleic Acids Res; 2016 Mar; 44(5):2283-97. PubMed ID: 26896798
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An intron enhancer recognized by splicing factors activates polyadenylation.
    Lou H; Gagel RF; Berget SM
    Genes Dev; 1996 Jan; 10(2):208-19. PubMed ID: 8566754
    [TBL] [Abstract][Full Text] [Related]  

  • 19. U1 small nuclear RNA-promoted exon selection requires a minimal distance between the position of U1 binding and the 3' splice site across the exon.
    Hwang DY; Cohen JB
    Mol Cell Biol; 1997 Dec; 17(12):7099-107. PubMed ID: 9372941
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Dimerization and protein binding specificity of the U2AF homology motif of the splicing factor Puf60.
    Corsini L; Hothorn M; Stier G; Rybin V; Scheffzek K; Gibson TJ; Sattler M
    J Biol Chem; 2009 Jan; 284(1):630-639. PubMed ID: 18974054
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 18.