These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

231 related articles for article (PubMed ID: 29864163)

  • 21. RCSB PDB Mobile: iOS and Android mobile apps to provide data access and visualization to the RCSB Protein Data Bank.
    Quinn GB; Bi C; Christie CH; Pang K; Prlić A; Nakane T; Zardecki C; Voigt M; Berman HM; Bourne PE; Rose PW
    Bioinformatics; 2015 Jan; 31(1):126-7. PubMed ID: 25183487
    [TBL] [Abstract][Full Text] [Related]  

  • 22. PDB-101: Educational resources supporting molecular explorations through biology and medicine.
    Zardecki C; Dutta S; Goodsell DS; Lowe R; Voigt M; Burley SK
    Protein Sci; 2022 Jan; 31(1):129-140. PubMed ID: 34601771
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Pre-calculated protein structure alignments at the RCSB PDB website.
    Prlic A; Bliven S; Rose PW; Bluhm WF; Bizon C; Godzik A; Bourne PE
    Bioinformatics; 2010 Dec; 26(23):2983-5. PubMed ID: 20937596
    [TBL] [Abstract][Full Text] [Related]  

  • 24. MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions.
    Hayashi T; Matsuzaki Y; Yanagisawa K; Ohue M; Akiyama Y
    BMC Bioinformatics; 2018 May; 19(Suppl 4):62. PubMed ID: 29745830
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank.
    Prlic A; Kalro T; Bhattacharya R; Christie C; Burley SK; Rose PW
    Bioinformatics; 2016 Dec; 32(24):3833-3835. PubMed ID: 27551105
    [TBL] [Abstract][Full Text] [Related]  

  • 26. PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank.
    Choudhary P; Feng Z; Berrisford J; Chao H; Ikegawa Y; Peisach E; Piehl DW; Smith J; Tanweer A; Varadi M; Westbrook JD; Young JY; Patwardhan A; Morris KL; Hoch JC; Kurisu G; Velankar S; Burley SK
    Database (Oxford); 2024 May; 2024():. PubMed ID: 38803272
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Remediation of the protein data bank archive.
    Henrick K; Feng Z; Bluhm WF; Dimitropoulos D; Doreleijers JF; Dutta S; Flippen-Anderson JL; Ionides J; Kamada C; Krissinel E; Lawson CL; Markley JL; Nakamura H; Newman R; Shimizu Y; Swaminathan J; Velankar S; Ory J; Ulrich EL; Vranken W; Westbrook J; Yamashita R; Yang H; Young J; Yousufuddin M; Berman HM
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D426-33. PubMed ID: 18073189
    [TBL] [Abstract][Full Text] [Related]  

  • 28. PDB explorer -- a web based algorithm for protein annotation viewer and 3D visualization.
    Nayarisseri A; Shardiwal RK; Yadav M; Kanungo N; Singh P; Shah P; Ahmed S
    Interdiscip Sci; 2014 Dec; 6(4):279-84. PubMed ID: 25118648
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Using the Tools and Resources of the RCSB Protein Data Bank.
    Costanzo LD; Ghosh S; Zardecki C; Burley SK
    Curr Protoc Bioinformatics; 2016 Sep; 55():1.9.1-1.9.35. PubMed ID: 27603019
    [TBL] [Abstract][Full Text] [Related]  

  • 30. RCSB Protein Data Bank: Enabling biomedical research and drug discovery.
    Goodsell DS; Zardecki C; Di Costanzo L; Duarte JM; Hudson BP; Persikova I; Segura J; Shao C; Voigt M; Westbrook JD; Young JY; Burley SK
    Protein Sci; 2020 Jan; 29(1):52-65. PubMed ID: 31531901
    [TBL] [Abstract][Full Text] [Related]  

  • 31. PDBe: Protein Data Bank in Europe.
    Velankar S; Alhroub Y; Best C; Caboche S; Conroy MJ; Dana JM; Fernandez Montecelo MA; van Ginkel G; Golovin A; Gore SP; Gutmanas A; Haslam P; Hendrickx PM; Heuson E; Hirshberg M; John M; Lagerstedt I; Mir S; Newman LE; Oldfield TJ; Patwardhan A; Rinaldi L; Sahni G; Sanz-García E; Sen S; Slowley R; Suarez-Uruena A; Swaminathan GJ; Symmons MF; Vranken WF; Wainwright M; Kleywegt GJ
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D445-52. PubMed ID: 22110033
    [TBL] [Abstract][Full Text] [Related]  

  • 32. 3D-PP: A Tool for Discovering Conserved Three-Dimensional Protein Patterns.
    Valdés-Jiménez A; Larriba-Pey JL; Núñez-Vivanco G; Reyes-Parada M
    Int J Mol Sci; 2019 Jun; 20(13):. PubMed ID: 31261733
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Validation of Structures in the Protein Data Bank.
    Gore S; Sanz García E; Hendrickx PMS; Gutmanas A; Westbrook JD; Yang H; Feng Z; Baskaran K; Berrisford JM; Hudson BP; Ikegawa Y; Kobayashi N; Lawson CL; Mading S; Mak L; Mukhopadhyay A; Oldfield TJ; Patwardhan A; Peisach E; Sahni G; Sekharan MR; Sen S; Shao C; Smart OS; Ulrich EL; Yamashita R; Quesada M; Young JY; Nakamura H; Markley JL; Berman HM; Burley SK; Velankar S; Kleywegt GJ
    Structure; 2017 Dec; 25(12):1916-1927. PubMed ID: 29174494
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank.
    Yang H; Guranovic V; Dutta S; Feng Z; Berman HM; Westbrook JD
    Acta Crystallogr D Biol Crystallogr; 2004 Oct; 60(Pt 10):1833-9. PubMed ID: 15388930
    [TBL] [Abstract][Full Text] [Related]  

  • 35. RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences.
    Burley SK; Bhikadiya C; Bi C; Bittrich S; Chen L; Crichlow GV; Christie CH; Dalenberg K; Di Costanzo L; Duarte JM; Dutta S; Feng Z; Ganesan S; Goodsell DS; Ghosh S; Green RK; Guranović V; Guzenko D; Hudson BP; Lawson CL; Liang Y; Lowe R; Namkoong H; Peisach E; Persikova I; Randle C; Rose A; Rose Y; Sali A; Segura J; Sekharan M; Shao C; Tao YP; Voigt M; Westbrook JD; Young JY; Zardecki C; Zhuravleva M
    Nucleic Acids Res; 2021 Jan; 49(D1):D437-D451. PubMed ID: 33211854
    [TBL] [Abstract][Full Text] [Related]  

  • 36. PDB-Metrics: a web tool for exploring the PDB contents.
    Fileto R; Kuser PR; Yamagishi ME; Ribeiro AA; Quinalia TG; Franco EH; Mancini AL; Higa RH; Oliveira SR; Santos EH; Vieira FD; Mazoni I; Cruz SA; Neshich G
    Genet Mol Res; 2006 Jun; 5(2):333-41. PubMed ID: 16819713
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Principles and characteristics of biological assemblies in experimentally determined protein structures.
    Xu Q; Dunbrack RL
    Curr Opin Struct Biol; 2019 Apr; 55():34-49. PubMed ID: 30965224
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server.
    Zheng H; Chordia MD; Cooper DR; Chruszcz M; Müller P; Sheldrick GM; Minor W
    Nat Protoc; 2014 Jan; 9(1):156-70. PubMed ID: 24356774
    [TBL] [Abstract][Full Text] [Related]  

  • 39. PDB-Explorer: a web-based interactive map of the protein data bank in shape space.
    Jin X; Awale M; Zasso M; Kostro D; Patiny L; Reymond JL
    BMC Bioinformatics; 2015 Oct; 16():339. PubMed ID: 26493835
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Intrinsic disorder in the Protein Data Bank.
    Le Gall T; Romero PR; Cortese MS; Uversky VN; Dunker AK
    J Biomol Struct Dyn; 2007 Feb; 24(4):325-42. PubMed ID: 17206849
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.