BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

141 related articles for article (PubMed ID: 29881444)

  • 1. A fast and accurate enumeration-based algorithm for haplotyping a triploid individual.
    Wu J; Zhang Q
    Algorithms Mol Biol; 2018; 13():10. PubMed ID: 29881444
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Haplotyping a single triploid individual based on genetic algorithm.
    Wu J; Chen X; Li X
    Biomed Mater Eng; 2014; 24(6):3753-62. PubMed ID: 25227091
    [TBL] [Abstract][Full Text] [Related]  

  • 3. HapTree: a novel Bayesian framework for single individual polyplotyping using NGS data.
    Berger E; Yorukoglu D; Peng J; Berger B
    PLoS Comput Biol; 2014 Mar; 10(3):e1003502. PubMed ID: 24675685
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A fast and accurate algorithm for diploid individual haplotype reconstruction.
    Wu J; Liang B
    J Bioinform Comput Biol; 2013 Aug; 11(4):1350010. PubMed ID: 23859274
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Haplotype assembly in polyploid genomes and identical by descent shared tracts.
    Aguiar D; Istrail S
    Bioinformatics; 2013 Jul; 29(13):i352-60. PubMed ID: 23813004
    [TBL] [Abstract][Full Text] [Related]  

  • 6. On the Minimum Error Correction Problem for Haplotype Assembly in Diploid and Polyploid Genomes.
    Bonizzoni P; Dondi R; Klau GW; Pirola Y; Pisanti N; Zaccaria S
    J Comput Biol; 2016 Sep; 23(9):718-36. PubMed ID: 27280382
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Haplotype reconstruction from SNP fragments by minimum error correction.
    Wang RS; Wu LY; Li ZP; Zhang XS
    Bioinformatics; 2005 May; 21(10):2456-62. PubMed ID: 15731204
    [TBL] [Abstract][Full Text] [Related]  

  • 8. HapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data.
    Aguiar D; Istrail S
    J Comput Biol; 2012 Jun; 19(6):577-90. PubMed ID: 22697235
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A model of higher accuracy for the individual haplotyping problem based on weighted SNP fragments and genotype with errors.
    Xie M; Wang J; Chen J
    Bioinformatics; 2008 Jul; 24(13):i105-13. PubMed ID: 18586702
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Joint haplotype assembly and genotype calling via sequential Monte Carlo algorithm.
    Ahn S; Vikalo H
    BMC Bioinformatics; 2015 Jul; 16():223. PubMed ID: 26178880
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Hap10: reconstructing accurate and long polyploid haplotypes using linked reads.
    Majidian S; Kahaei MH; de Ridder D
    BMC Bioinformatics; 2020 Jun; 21(1):253. PubMed ID: 32552661
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A fast and accurate algorithm for single individual haplotyping.
    Xie M; Wang J; Jiang T
    BMC Syst Biol; 2012; 6 Suppl 2(Suppl 2):S8. PubMed ID: 23282221
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Minimum conflict individual haplotyping from SNP fragments and related genotype.
    Zhang XS; Wang RS; Wu LY; Zhang W
    Evol Bioinform Online; 2007 Feb; 2():261-70. PubMed ID: 19455219
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Using genetic algorithm in reconstructing single individual haplotype with minimum error correction.
    Wang TC; Taheri J; Zomaya AY
    J Biomed Inform; 2012 Oct; 45(5):922-30. PubMed ID: 22465411
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A heuristic algorithm for haplotype reconstruction from aligned weighted SNP fragments.
    Wu J; Wang J; Chen J
    Int J Bioinform Res Appl; 2013; 9(1):13-24. PubMed ID: 23207995
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The haplotype assembly model with genotype information and iterative local-exhaustive search algorithm.
    Wang Y; Feng E; Wang R; Zhang D
    Comput Biol Chem; 2007 Aug; 31(4):288-93. PubMed ID: 17631422
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Efficient fast heuristic algorithms for minimum error correction haplotyping from SNP fragments.
    Anaraki MP; Sadeghi M
    Int J Comput Biol Drug Des; 2014; 7(4):358-68. PubMed ID: 25539847
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A highly accurate heuristic algorithm for the haplotype assembly problem.
    Deng F; Cui W; Wang L
    BMC Genomics; 2013; 14 Suppl 2(Suppl 2):S2. PubMed ID: 23445458
    [TBL] [Abstract][Full Text] [Related]  

  • 19. GenHap: a novel computational method based on genetic algorithms for haplotype assembly.
    Tangherloni A; Spolaor S; Rundo L; Nobile MS; Cazzaniga P; Mauri G; LiĆ² P; Merelli I; Besozzi D
    BMC Bioinformatics; 2019 Apr; 20(Suppl 4):172. PubMed ID: 30999845
    [TBL] [Abstract][Full Text] [Related]  

  • 20. LGH: A Fast and Accurate Algorithm for Single Individual Haplotyping Based on a Two-Locus Linkage Graph.
    Xie M; Wang J; Chen X
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(6):1255-66. PubMed ID: 26671798
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.