179 related articles for article (PubMed ID: 29885984)
1. Transcriptogenomics identification and characterization of RNA editing sites in human primary monocytes using high-depth next generation sequencing data.
Leong WM; Ripen AM; Mirsafian H; Mohamad SB; Merican AF
Genomics; 2019 Jul; 111(4):899-905. PubMed ID: 29885984
[TBL] [Abstract][Full Text] [Related]
2. Elucidating the editome: bioinformatics approaches for RNA editing detection.
Diroma MA; Ciaccia L; Pesole G; Picardi E
Brief Bioinform; 2019 Mar; 20(2):436-447. PubMed ID: 29040360
[TBL] [Abstract][Full Text] [Related]
3. JACUSA: site-specific identification of RNA editing events from replicate sequencing data.
Piechotta M; Wyler E; Ohler U; Landthaler M; Dieterich C
BMC Bioinformatics; 2017 Jan; 18(1):7. PubMed ID: 28049429
[TBL] [Abstract][Full Text] [Related]
4. Genome-Wide Analysis of A-to-I RNA Editing.
Savva YA; Laurent GS; Reenan RA
Methods Mol Biol; 2016; 1358():255-68. PubMed ID: 26463388
[TBL] [Abstract][Full Text] [Related]
5. Biochemical and Transcriptome-Wide Identification of A-to-I RNA Editing Sites by ICE-Seq.
Okada S; Sakurai M; Ueda H; Suzuki T
Methods Enzymol; 2015; 560():331-53. PubMed ID: 26253977
[TBL] [Abstract][Full Text] [Related]
6. RNAEditor: easy detection of RNA editing events and the introduction of editing islands.
John D; Weirick T; Dimmeler S; Uchida S
Brief Bioinform; 2017 Nov; 18(6):993-1001. PubMed ID: 27694136
[TBL] [Abstract][Full Text] [Related]
7. Detection of canonical A-to-G editing events at 3' UTRs and microRNA target sites in human lungs using next-generation sequencing.
Soundararajan R; Stearns TM; Griswold AL; Mehta A; Czachor A; Fukumoto J; Lockey RF; King BL; Kolliputi N
Oncotarget; 2015 Nov; 6(34):35726-36. PubMed ID: 26486088
[TBL] [Abstract][Full Text] [Related]
8. MIRIA: a webserver for statistical, visual and meta-analysis of RNA editing data in mammals.
Feng X; Wang Z; Li H; Li SC
BMC Bioinformatics; 2019 Dec; 20(Suppl 24):596. PubMed ID: 31861975
[TBL] [Abstract][Full Text] [Related]
9. Databases for RNA Editing Collections.
Lo Giudice C; Mansi L; Pesole G; Picardi E
Methods Mol Biol; 2021; 2284():467-480. PubMed ID: 33835458
[TBL] [Abstract][Full Text] [Related]
10. Integrative analyses of RNA editing, alternative splicing, and expression of young genes in human brain transcriptome by deep RNA sequencing.
Wu DD; Ye LQ; Li Y; Sun YB; Shao Y; Chen C; Zhu Z; Zhong L; Wang L; Irwin DM; Zhang YE; Zhang YP
J Mol Cell Biol; 2015 Aug; 7(4):314-25. PubMed ID: 26186942
[TBL] [Abstract][Full Text] [Related]
11. High-Throughput Sequencing to Detect DNA-RNA Changes.
Lo Giudice C; Pesole G; Picardi E
Methods Mol Biol; 2021; 2181():193-212. PubMed ID: 32729082
[TBL] [Abstract][Full Text] [Related]
12. Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates.
Frésard L; Leroux S; Roux PF; Klopp C; Fabre S; Esquerré D; Dehais P; Djari A; Gourichon D; Lagarrigue S; Pitel F
PLoS One; 2015; 10(5):e0126776. PubMed ID: 26024316
[TBL] [Abstract][Full Text] [Related]
13. L-GIREMI uncovers RNA editing sites in long-read RNA-seq.
Liu Z; Quinones-Valdez G; Fu T; Huang E; Choudhury M; Reese F; Mortazavi A; Xiao X
Genome Biol; 2023 Jul; 24(1):171. PubMed ID: 37474948
[TBL] [Abstract][Full Text] [Related]
14. Analysis of RNA Editing Sites from RNA-Seq Data Using GIREMI.
Zhang Q
Methods Mol Biol; 2018; 1751():101-108. PubMed ID: 29508292
[TBL] [Abstract][Full Text] [Related]
15. DREAM: a webserver for the identification of editing sites in mature miRNAs using deep sequencing data.
Alon S; Erew M; Eisenberg E
Bioinformatics; 2015 Aug; 31(15):2568-70. PubMed ID: 25840043
[TBL] [Abstract][Full Text] [Related]
16. Single-nucleotide variants in human RNA: RNA editing and beyond.
Guo Y; Yu H; Samuels DC; Yue W; Ness S; Zhao YY
Brief Funct Genomics; 2019 Feb; 18(1):30-39. PubMed ID: 30312373
[TBL] [Abstract][Full Text] [Related]
17. Identification of Symmetrical RNA Editing Events in the Mitochondria of Salvia miltiorrhiza by Strand-specific RNA Sequencing.
Wu B; Chen H; Shao J; Zhang H; Wu K; Liu C
Sci Rep; 2017 Feb; 7():42250. PubMed ID: 28186130
[TBL] [Abstract][Full Text] [Related]
18. Using deep sequencing data for identification of editing sites in mature miRNAs.
Alon S; Eisenberg E
Methods Mol Biol; 2015; 1269():231-42. PubMed ID: 25577382
[TBL] [Abstract][Full Text] [Related]
19. Accurate identification of A-to-I RNA editing in human by transcriptome sequencing.
Bahn JH; Lee JH; Li G; Greer C; Peng G; Xiao X
Genome Res; 2012 Jan; 22(1):142-50. PubMed ID: 21960545
[TBL] [Abstract][Full Text] [Related]
20. Identification of human RNA editing sites: A historical perspective.
Ramaswami G; Li JB
Methods; 2016 Sep; 107():42-7. PubMed ID: 27208508
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
