These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

152 related articles for article (PubMed ID: 29897884)

  • 1. BioSankey: Visualization of Microbial Communities Over Time.
    Platzer A; Polzin J; Rembart K; Han PP; Rauer D; Nussbaumer T
    J Integr Bioinform; 2018 Jun; 15(4):. PubMed ID: 29897884
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function.
    Keegan KP; Glass EM; Meyer F
    Methods Mol Biol; 2016; 1399():207-33. PubMed ID: 26791506
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ICoVeR - an interactive visualization tool for verification and refinement of metagenomic bins.
    Broeksema B; Calusinska M; McGee F; Winter K; Bongiovanni F; Goux X; Wilmes P; Delfosse P; Ghoniem M
    BMC Bioinformatics; 2017 May; 18(1):233. PubMed ID: 28464793
    [TBL] [Abstract][Full Text] [Related]  

  • 4. VITCOMIC2: visualization tool for the phylogenetic composition of microbial communities based on 16S rRNA gene amplicons and metagenomic shotgun sequencing.
    Mori H; Maruyama T; Yano M; Yamada T; Kurokawa K
    BMC Syst Biol; 2018 Mar; 12(Suppl 2):30. PubMed ID: 29560821
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data.
    Dhariwal A; Chong J; Habib S; King IL; Agellon LB; Xia J
    Nucleic Acids Res; 2017 Jul; 45(W1):W180-W188. PubMed ID: 28449106
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Elviz - exploration of metagenome assemblies with an interactive visualization tool.
    Cantor M; Nordberg H; Smirnova T; Hess M; Tringe S; Dubchak I
    BMC Bioinformatics; 2015 Apr; 16(1):130. PubMed ID: 25928663
    [TBL] [Abstract][Full Text] [Related]  

  • 7. TreeSeq, a Fast and Intuitive Tool for Analysis of Whole Genome and Metagenomic Sequence Data.
    Wintermans B; Brandt B; Vandenbroucke-Grauls C; Budding A
    PLoS One; 2015; 10(5):e0123851. PubMed ID: 25933115
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling.
    Flygare S; Simmon K; Miller C; Qiao Y; Kennedy B; Di Sera T; Graf EH; Tardif KD; Kapusta A; Rynearson S; Stockmann C; Queen K; Tong S; Voelkerding KV; Blaschke A; Byington CL; Jain S; Pavia A; Ampofo K; Eilbeck K; Marth G; Yandell M; Schlaberg R
    Genome Biol; 2016 May; 17(1):111. PubMed ID: 27224977
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evolution of an 8-week upper-division metagenomics course: Diagramming a learning path from observational to quantitative microbiome analysis.
    Goller CC; Ott LE
    Biochem Mol Biol Educ; 2020 Jul; 48(4):391-403. PubMed ID: 32294307
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SAMSA2: a standalone metatranscriptome analysis pipeline.
    Westreich ST; Treiber ML; Mills DA; Korf I; Lemay DG
    BMC Bioinformatics; 2018 May; 19(1):175. PubMed ID: 29783945
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Visual Omics Explorer (VOE): a cross-platform portal for interactive data visualization.
    Kim B; Ali T; Hosmer S; Krampis K
    Bioinformatics; 2016 Jul; 32(13):2050-2. PubMed ID: 27153572
    [TBL] [Abstract][Full Text] [Related]  

  • 12. QuickRNASeq lifts large-scale RNA-seq data analyses to the next level of automation and interactive visualization.
    Zhao S; Xi L; Quan J; Xi H; Zhang Y; von Schack D; Vincent M; Zhang B
    BMC Genomics; 2016 Jan; 17():39. PubMed ID: 26747388
    [TBL] [Abstract][Full Text] [Related]  

  • 13. MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.
    Zhu Z; Niu B; Chen J; Wu S; Sun S; Li W
    Bioinformatics; 2013 Jan; 29(1):122-3. PubMed ID: 23044549
    [TBL] [Abstract][Full Text] [Related]  

  • 14. COMAN: a web server for comprehensive metatranscriptomics analysis.
    Ni Y; Li J; Panagiotou G
    BMC Genomics; 2016 Aug; 17(1):622. PubMed ID: 27515514
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Web-igloo: a web based platform for multivariate data visualization.
    Kuntal BK; Mande SS
    Bioinformatics; 2017 Feb; 33(4):615-617. PubMed ID: 27797774
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Species classifier choice is a key consideration when analysing low-complexity food microbiome data.
    Walsh AM; Crispie F; O'Sullivan O; Finnegan L; Claesson MJ; Cotter PD
    Microbiome; 2018 Mar; 6(1):50. PubMed ID: 29554948
    [TBL] [Abstract][Full Text] [Related]  

  • 17. ViromeScan: a new tool for metagenomic viral community profiling.
    Rampelli S; Soverini M; Turroni S; Quercia S; Biagi E; Brigidi P; Candela M
    BMC Genomics; 2016 Mar; 17():165. PubMed ID: 26932765
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Chordomics: a visualization tool for linking function to phylogeny in microbiomes.
    McDonnell K; Waters N; Howley E; Abram F
    Bioinformatics; 2020 Feb; 36(4):1309-1310. PubMed ID: 31539022
    [TBL] [Abstract][Full Text] [Related]  

  • 19. gcMeta: a Global Catalogue of Metagenomics platform to support the archiving, standardization and analysis of microbiome data.
    Shi W; Qi H; Sun Q; Fan G; Liu S; Wang J; Zhu B; Liu H; Zhao F; Wang X; Hu X; Li W; Liu J; Tian Y; Wu L; Ma J
    Nucleic Acids Res; 2019 Jan; 47(D1):D637-D648. PubMed ID: 30365027
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Practical considerations for sampling and data analysis in contemporary metagenomics-based environmental studies.
    Staley C; Sadowsky MJ
    J Microbiol Methods; 2018 Nov; 154():14-18. PubMed ID: 30287354
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.