159 related articles for article (PubMed ID: 29917149)
1. Transitions in DNA polymerase β μs-ms dynamics related to substrate binding and catalysis.
DeRose EF; Kirby TW; Mueller GA; Beard WA; Wilson SH; London RE
Nucleic Acids Res; 2018 Aug; 46(14):7309-7322. PubMed ID: 29917149
[TBL] [Abstract][Full Text] [Related]
2. Dynamic characterization of a DNA repair enzyme: NMR studies of [methyl-13C]methionine-labeled DNA polymerase beta.
Bose-Basu B; DeRose EF; Kirby TW; Mueller GA; Beard WA; Wilson SH; London RE
Biochemistry; 2004 Jul; 43(28):8911-22. PubMed ID: 15248749
[TBL] [Abstract][Full Text] [Related]
3. Substrate-dependent millisecond domain motions in DNA polymerase β.
Berlow RB; Swain M; Dalal S; Sweasy JB; Loria JP
J Mol Biol; 2012 Jun; 419(3-4):171-82. PubMed ID: 22446382
[TBL] [Abstract][Full Text] [Related]
4. Backbone dynamics and refined solution structure of the N-terminal domain of DNA polymerase beta. Correlation with DNA binding and dRP lyase activity.
Maciejewski MW; Liu D; Prasad R; Wilson SH; Mullen GP
J Mol Biol; 2000 Feb; 296(1):229-53. PubMed ID: 10656829
[TBL] [Abstract][Full Text] [Related]
5. DNA polymerase X of African swine fever virus: insertion fidelity on gapped DNA substrates and AP lyase activity support a role in base excision repair of viral DNA.
García-Escudero R; García-Díaz M; Salas ML; Blanco L; Salas J
J Mol Biol; 2003 Mar; 326(5):1403-12. PubMed ID: 12595253
[TBL] [Abstract][Full Text] [Related]
6. I260Q DNA polymerase β highlights precatalytic conformational rearrangements critical for fidelity.
Liptak C; Mahmoud MM; Eckenroth BE; Moreno MV; East K; Alnajjar KS; Huang J; Towle-Weicksel JB; Doublié S; Loria JP; Sweasy JB
Nucleic Acids Res; 2018 Nov; 46(20):10740-10756. PubMed ID: 30239932
[TBL] [Abstract][Full Text] [Related]
7. The nature of the DNA substrate influences pre-catalytic conformational changes of DNA polymerase β.
Huang J; Alnajjar KS; Mahmoud MM; Eckenroth B; Doublié S; Sweasy JB
J Biol Chem; 2018 Sep; 293(39):15084-15094. PubMed ID: 30068550
[TBL] [Abstract][Full Text] [Related]
8. NMR determination of lysine pKa values in the Pol lambda lyase domain: mechanistic implications.
Gao G; DeRose EF; Kirby TW; London RE
Biochemistry; 2006 Feb; 45(6):1785-94. PubMed ID: 16460025
[TBL] [Abstract][Full Text] [Related]
9. Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity.
Pelletier H; Sawaya MR; Wolfle W; Wilson SH; Kraut J
Biochemistry; 1996 Oct; 35(39):12742-61. PubMed ID: 8841118
[TBL] [Abstract][Full Text] [Related]
10. DNA polymerase beta: contributions of template-positioning and dNTP triphosphate-binding residues to catalysis and fidelity.
Kraynov VS; Showalter AK; Liu J; Zhong X; Tsai MD
Biochemistry; 2000 Dec; 39(51):16008-15. PubMed ID: 11123928
[TBL] [Abstract][Full Text] [Related]
11. Rapid segmental and subdomain motions of DNA polymerase beta.
Kim SJ; Beard WA; Harvey J; Shock DD; Knutson JR; Wilson SH
J Biol Chem; 2003 Feb; 278(7):5072-81. PubMed ID: 12458221
[TBL] [Abstract][Full Text] [Related]
12. A thymine isostere in the templating position disrupts assembly of the closed DNA polymerase beta ternary complex.
Kirby TW; DeRose EF; Beard WA; Wilson SH; London RE
Biochemistry; 2005 Nov; 44(46):15230-7. PubMed ID: 16285726
[TBL] [Abstract][Full Text] [Related]
13. DNA polymerase beta: effects of gapped DNA substrates on dNTP specificity, fidelity, processivity and conformational changes.
Ahn J; Kraynov VS; Zhong X; Werneburg BG; Tsai MD
Biochem J; 1998 Apr; 331 ( Pt 1)(Pt 1):79-87. PubMed ID: 9512464
[TBL] [Abstract][Full Text] [Related]
14. Defective Nucleotide Release by DNA Polymerase β Mutator Variant E288K Is the Basis of Its Low Fidelity.
Mahmoud MM; Schechter A; Alnajjar KS; Huang J; Towle-Weicksel J; Eckenroth BE; Doublié S; Sweasy JB
Biochemistry; 2017 Oct; 56(41):5550-5559. PubMed ID: 28945359
[TBL] [Abstract][Full Text] [Related]
15. Mismatch-induced conformational distortions in polymerase beta support an induced-fit mechanism for fidelity.
Arora K; Beard WA; Wilson SH; Schlick T
Biochemistry; 2005 Oct; 44(40):13328-41. PubMed ID: 16201758
[TBL] [Abstract][Full Text] [Related]
16. Lysines in the lyase active site of DNA polymerase β destabilize nonspecific DNA binding, facilitating searching and DNA gap recognition.
Howard MJ; Horton JK; Zhao ML; Wilson SH
J Biol Chem; 2020 Aug; 295(34):12181-12187. PubMed ID: 32647014
[TBL] [Abstract][Full Text] [Related]
17. Recognition of template-primer and gapped DNA substrates by the human DNA polymerase beta.
Rajendran S; Jezewska MJ; Bujalowski W
J Mol Biol; 2001 May; 308(3):477-500. PubMed ID: 11327782
[TBL] [Abstract][Full Text] [Related]
18. Substrate rescue of DNA polymerase β containing a catastrophic L22P mutation.
Kirby TW; Derose EF; Beard WA; Shock DD; Wilson SH; London RE
Biochemistry; 2014 Apr; 53(14):2413-22. PubMed ID: 24655288
[TBL] [Abstract][Full Text] [Related]
19. Sequential side-chain residue motions transform the binary into the ternary state of DNA polymerase lambda.
Foley MC; Arora K; Schlick T
Biophys J; 2006 Nov; 91(9):3182-95. PubMed ID: 16920835
[TBL] [Abstract][Full Text] [Related]
20. NMR assignment of polymerase beta labeled with 2H, 13C, and 15N in complex with substrate DNA.
Mueller GA; DeRose EF; Kirby TW; London RE
Biomol NMR Assign; 2007 Jul; 1(1):33-5. PubMed ID: 19421423
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
