These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 29973633)

  • 1. Genotype-Corrector: improved genotype calls for genetic mapping in F
    Miao C; Fang J; Li D; Liang P; Zhang X; Yang J; Schnable JC; Tang H
    Sci Rep; 2018 Jul; 8(1):10088. PubMed ID: 29973633
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Using genotype array data to compare multi- and single-sample variant calls and improve variant call sets from deep coverage whole-genome sequencing data.
    Shringarpure SS; Mathias RA; Hernandez RD; O'Connor TD; Szpiech ZA; Torres R; De La Vega FM; Bustamante CD; Barnes KC; Taub MA;
    Bioinformatics; 2017 Apr; 33(8):1147-1153. PubMed ID: 28035032
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Low-depth genotyping-by-sequencing (GBS) in a bovine population: strategies to maximize the selection of high quality genotypes and the accuracy of imputation.
    Brouard JS; Boyle B; Ibeagha-Awemu EM; Bissonnette N
    BMC Genet; 2017 Apr; 18(1):32. PubMed ID: 28381212
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Whole-genome characterization in pedigreed non-human primates using genotyping-by-sequencing (GBS) and imputation.
    Bimber BN; Raboin MJ; Letaw J; Nevonen KA; Spindel JE; McCouch SR; Cervera-Juanes R; Spindel E; Carbone L; Ferguson B; Vinson A
    BMC Genomics; 2016 Aug; 17(1):676. PubMed ID: 27558348
    [TBL] [Abstract][Full Text] [Related]  

  • 5. One Size Doesn't Fit All - RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies.
    Yuan S; Johnston HR; Zhang G; Li Y; Hu YJ; Qin ZS
    PLoS Comput Biol; 2015 Aug; 11(8):e1004448. PubMed ID: 26267278
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A comparison of genotyping-by-sequencing analysis methods on low-coverage crop datasets shows advantages of a new workflow, GB-eaSy.
    Wickland DP; Battu G; Hudson KA; Diers BW; Hudson ME
    BMC Bioinformatics; 2017 Dec; 18(1):586. PubMed ID: 29281959
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Scanning and Filling: Ultra-Dense SNP Genotyping Combining Genotyping-By-Sequencing, SNP Array and Whole-Genome Resequencing Data.
    Torkamaneh D; Belzile F
    PLoS One; 2015; 10(7):e0131533. PubMed ID: 26161900
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genetic dissection of maize plant architecture with an ultra-high density bin map based on recombinant inbred lines.
    Zhou Z; Zhang C; Zhou Y; Hao Z; Wang Z; Zeng X; Di H; Li M; Zhang D; Yong H; Zhang S; Weng J; Li X
    BMC Genomics; 2016 Mar; 17():178. PubMed ID: 26940065
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Ultrahigh-density linkage map for cultivated cucumber (Cucumis sativus L.) using a single-nucleotide polymorphism genotyping array.
    Rubinstein M; Katzenellenbogen M; Eshed R; Rozen A; Katzir N; Colle M; Yang L; Grumet R; Weng Y; Sherman A; Ophir R
    PLoS One; 2015; 10(4):e0124101. PubMed ID: 25874931
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation.
    Ward JA; Bhangoo J; Fernández-Fernández F; Moore P; Swanson JD; Viola R; Velasco R; Bassil N; Weber CA; Sargent DJ
    BMC Genomics; 2013 Jan; 14():2. PubMed ID: 23324311
    [TBL] [Abstract][Full Text] [Related]  

  • 11. UGbS-Flex, a novel bioinformatics pipeline for imputation-free SNP discovery in polyploids without a reference genome: finger millet as a case study.
    Qi P; Gimode D; Saha D; Schröder S; Chakraborty D; Wang X; Dida MM; Malmberg RL; Devos KM
    BMC Plant Biol; 2018 Jun; 18(1):117. PubMed ID: 29902967
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Application of Population Sequencing (POPSEQ) for Ordering and Imputing Genotyping-by-Sequencing Markers in Hexaploid Wheat.
    Edae EA; Bowden RL; Poland J
    G3 (Bethesda); 2015 Nov; 5(12):2547-53. PubMed ID: 26530417
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evaluating Imputation Algorithms for Low-Depth Genotyping-By-Sequencing (GBS) Data.
    Chan AW; Hamblin MT; Jannink JL
    PLoS One; 2016; 11(8):e0160733. PubMed ID: 27537694
    [TBL] [Abstract][Full Text] [Related]  

  • 14. High-throughput genomics in sorghum: from whole-genome resequencing to a SNP screening array.
    Bekele WA; Wieckhorst S; Friedt W; Snowdon RJ
    Plant Biotechnol J; 2013 Dec; 11(9):1112-25. PubMed ID: 23919585
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Accurate Genotype Imputation in Multiparental Populations from Low-Coverage Sequence.
    Zheng C; Boer MP; van Eeuwijk FA
    Genetics; 2018 Sep; 210(1):71-82. PubMed ID: 30045858
    [TBL] [Abstract][Full Text] [Related]  

  • 16. QTL mapping using high-throughput sequencing.
    Jamann TM; Balint-Kurti PJ; Holland JB
    Methods Mol Biol; 2015; 1284():257-85. PubMed ID: 25757777
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Effect of genotyping errors on linkage map construction based on repeated chip analysis of two recombinant inbred line populations in wheat (Triticum aestivum L.).
    Wang X; Wang J; Xia X; Xu X; Li L; Cao S; Hao Y; Zhang L
    BMC Plant Biol; 2024 Apr; 24(1):306. PubMed ID: 38644480
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data.
    Rastas P
    Bioinformatics; 2017 Dec; 33(23):3726-3732. PubMed ID: 29036272
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An ultra-high density genetic linkage map of perennial ryegrass (Lolium perenne) using genotyping by sequencing (GBS) based on a reference shotgun genome assembly.
    Velmurugan J; Mollison E; Barth S; Marshall D; Milne L; Creevey CJ; Lynch B; Meally H; McCabe M; Milbourne D
    Ann Bot; 2016 Jul; 118(1):71-87. PubMed ID: 27268483
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A fully automated pipeline for quantitative genotype calling from next generation sequencing data in autopolyploids.
    Pereira GS; Garcia AAF; Margarido GRA
    BMC Bioinformatics; 2018 Nov; 19(1):398. PubMed ID: 30382832
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.