These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

123 related articles for article (PubMed ID: 29987792)

  • 21. Computational methods for transcriptome annotation and quantification using RNA-seq.
    Garber M; Grabherr MG; Guttman M; Trapnell C
    Nat Methods; 2011 Jun; 8(6):469-77. PubMed ID: 21623353
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Characterization of the floral transcriptome of Moso bamboo (Phyllostachys edulis) at different flowering developmental stages by transcriptome sequencing and RNA-seq analysis.
    Gao J; Zhang Y; Zhang C; Qi F; Li X; Mu S; Peng Z
    PLoS One; 2014; 9(6):e98910. PubMed ID: 24915141
    [TBL] [Abstract][Full Text] [Related]  

  • 23. It's DE-licious: A Recipe for Differential Expression Analyses of RNA-seq Experiments Using Quasi-Likelihood Methods in edgeR.
    Lun AT; Chen Y; Smyth GK
    Methods Mol Biol; 2016; 1418():391-416. PubMed ID: 27008025
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Grape RNA-Seq analysis pipeline environment.
    Knowles DG; Röder M; Merkel A; Guigó R
    Bioinformatics; 2013 Mar; 29(5):614-21. PubMed ID: 23329413
    [TBL] [Abstract][Full Text] [Related]  

  • 25. RNA-Seq analysis of seasonal and individual variation in blood transcriptomes of healthy managed bottlenose dolphins.
    Morey JS; Neely MG; Lunardi D; Anderson PE; Schwacke LH; Campbell M; Van Dolah FM
    BMC Genomics; 2016 Sep; 17(1):720. PubMed ID: 27608714
    [TBL] [Abstract][Full Text] [Related]  

  • 26. GRO-seq, A Tool for Identification of Transcripts Regulating Gene Expression.
    Lopes R; Agami R; Korkmaz G
    Methods Mol Biol; 2017; 1543():45-55. PubMed ID: 28349421
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Quantitative Comparison of Large-Scale DNA Enrichment Sequencing Data.
    Lienhard M; Chavez L
    Methods Mol Biol; 2016; 1418():191-208. PubMed ID: 27008016
    [TBL] [Abstract][Full Text] [Related]  

  • 28. iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data.
    Ge SX; Son EW; Yao R
    BMC Bioinformatics; 2018 Dec; 19(1):534. PubMed ID: 30567491
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Comprehensive evaluation of AmpliSeq transcriptome, a novel targeted whole transcriptome RNA sequencing methodology for global gene expression analysis.
    Li W; Turner A; Aggarwal P; Matter A; Storvick E; Arnett DK; Broeckel U
    BMC Genomics; 2015 Dec; 16():1069. PubMed ID: 26673413
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Quantitative transcriptome analysis using RNA-seq.
    Külahoglu C; Bräutigam A
    Methods Mol Biol; 2014; 1158():71-91. PubMed ID: 24792045
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Transcriptomic Analysis of C. elegans RNA Sequencing Data Through the Tuxedo Suite on the Galaxy Project.
    Amrit FRG; Ghazi A
    J Vis Exp; 2017 Apr; (122):. PubMed ID: 28448031
    [TBL] [Abstract][Full Text] [Related]  

  • 32. DNA Methylation and Transcriptomic Next-Generation Technologies in Cereal Genomics.
    Soto-Cardinault CG; Duarte-Aké F; De-la-Peña C; Góngora-Castillo E
    Methods Mol Biol; 2020; 2072():65-84. PubMed ID: 31541439
    [TBL] [Abstract][Full Text] [Related]  

  • 33. TACO produces robust multisample transcriptome assemblies from RNA-seq.
    Niknafs YS; Pandian B; Iyer HK; Chinnaiyan AM; Iyer MK
    Nat Methods; 2017 Jan; 14(1):68-70. PubMed ID: 27869815
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Analysis of RNA-Seq Data Using TopHat and Cufflinks.
    Ghosh S; Chan CK
    Methods Mol Biol; 2016; 1374():339-61. PubMed ID: 26519415
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Bioinformatic Pipelines to Analyze lncRNAs RNAseq Data.
    Agnelli L; Bortoluzzi S; Pruneri G
    Methods Mol Biol; 2021; 2348():55-69. PubMed ID: 34160799
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview.
    Slovin S; Carissimo A; Panariello F; Grimaldi A; Bouché V; Gambardella G; Cacchiarelli D
    Methods Mol Biol; 2021; 2284():343-365. PubMed ID: 33835452
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Transcriptome Profiles of Human Lung Epithelial Cells A549 Interacting with Aspergillus fumigatus by RNA-Seq.
    Chen F; Zhang C; Jia X; Wang S; Wang J; Chen Y; Zhao J; Tian S; Han X; Han L
    PLoS One; 2015; 10(8):e0135720. PubMed ID: 26273834
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Predicting gene regulatory networks of soybean nodulation from RNA-Seq transcriptome data.
    Zhu M; Dahmen JL; Stacey G; Cheng J
    BMC Bioinformatics; 2013 Sep; 14():278. PubMed ID: 24053776
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Experimental Design and Power Calculation for RNA-seq Experiments.
    Wu Z; Wu H
    Methods Mol Biol; 2016; 1418():379-90. PubMed ID: 27008024
    [TBL] [Abstract][Full Text] [Related]  

  • 40. GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality.
    Wu TD; Reeder J; Lawrence M; Becker G; Brauer MJ
    Methods Mol Biol; 2016; 1418():283-334. PubMed ID: 27008021
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.