These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

112 related articles for article (PubMed ID: 29990287)

  • 41. Exact median-tree inference for unrooted reconciliation costs.
    Górecki P; Markin A; Eulenstein O
    BMC Evol Biol; 2020 Oct; 20(Suppl 1):136. PubMed ID: 33115401
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock.
    Zharkikh A; Li WH
    Mol Biol Evol; 1992 Nov; 9(6):1119-47. PubMed ID: 1435238
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Orthology prediction at scalable resolution by phylogenetic tree analysis.
    van der Heijden RT; Snel B; van Noort V; Huynen MA
    BMC Bioinformatics; 2007 Mar; 8():83. PubMed ID: 17346331
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Probabilistic orthology analysis.
    Sennblad B; Lagergren J
    Syst Biol; 2009 Aug; 58(4):411-24. PubMed ID: 20525594
    [TBL] [Abstract][Full Text] [Related]  

  • 45. TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees.
    Marcet-Houben M; Gabaldón T
    Nucleic Acids Res; 2011 May; 39(10):e66. PubMed ID: 21335609
    [TBL] [Abstract][Full Text] [Related]  

  • 46. GeneRax: A Tool for Species-Tree-Aware Maximum Likelihood-Based Gene  Family Tree Inference under Gene Duplication, Transfer, and Loss.
    Morel B; Kozlov AM; Stamatakis A; Szöllősi GJ
    Mol Biol Evol; 2020 Sep; 37(9):2763-2774. PubMed ID: 32502238
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Multiple consensus trees: a method to separate divergent genes.
    Guénoche A
    BMC Bioinformatics; 2013 Feb; 14():46. PubMed ID: 23394478
    [TBL] [Abstract][Full Text] [Related]  

  • 48. GIGA: a simple, efficient algorithm for gene tree inference in the genomic age.
    Thomas PD
    BMC Bioinformatics; 2010 Jun; 11():312. PubMed ID: 20534164
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.
    Mai U; Sayyari E; Mirarab S
    PLoS One; 2017; 12(8):e0182238. PubMed ID: 28800608
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Parameter Estimation and Species Tree Rooting Using ALE and GeneRax.
    Williams TA; Davín AA; Morel B; Szánthó LL; Spang A; Stamatakis A; Hugenholtz P; Szöllősi GJ
    Genome Biol Evol; 2023 Jul; 15(7):. PubMed ID: 37463417
    [TBL] [Abstract][Full Text] [Related]  

  • 51. A modification of the PHYLIP program: A solution for the redundant cluster problem, and an implementation of an automatic bootstrapping on trees inferred from original data.
    Shimada MK; Nishida T
    Mol Phylogenet Evol; 2017 Apr; 109():409-414. PubMed ID: 28232198
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Isometric gene tree reconciliation revisited.
    Brejová B; Gafurov A; Pardubská D; Sabo M; Vinař T
    Algorithms Mol Biol; 2017; 12():17. PubMed ID: 28630644
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Species Tree Inference Using a Mixture Model.
    Ullah I; Parviainen P; Lagergren J
    Mol Biol Evol; 2015 Sep; 32(9):2469-82. PubMed ID: 25963975
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Genome-wide comparative analysis of phylogenetic trees: the prokaryotic forest of life.
    Puigbò P; Wolf YI; Koonin EV
    Methods Mol Biol; 2012; 856():53-79. PubMed ID: 22399455
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Statistical phylogenetic tree analysis using differences of means.
    Arnaoudova E; Haws DC; Huggins P; Jaromczyk JW; Moore N; Schardl CL; Yoshida R
    Front Neurosci; 2010; 4():. PubMed ID: 20802801
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Genomic duplication problems for unrooted gene trees.
    Paszek J; Górecki P
    BMC Genomics; 2016 Jan; 17 Suppl 1(Suppl 1):15. PubMed ID: 26818591
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Genome-Wide Comparative Analysis of Phylogenetic Trees: The Prokaryotic Forest of Life.
    Puigbò P; Wolf YI; Koonin EV
    Methods Mol Biol; 2019; 1910():241-269. PubMed ID: 31278667
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Implementing and testing Bayesian and maximum-likelihood supertree methods in phylogenetics.
    Akanni WA; Wilkinson M; Creevey CJ; Foster PG; Pisani D
    R Soc Open Sci; 2015 Aug; 2(8):140436. PubMed ID: 26361544
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Efficient exploration of the space of reconciled gene trees.
    Szöllõsi GJ; Rosikiewicz W; Boussau B; Tannier E; Daubin V
    Syst Biol; 2013 Nov; 62(6):901-12. PubMed ID: 23925510
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Reconciliation with non-binary species trees.
    Vernot B; Stolzer M; Goldman A; Durand D
    Comput Syst Bioinformatics Conf; 2007; 6():441-52. PubMed ID: 17951846
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.