BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

348 related articles for article (PubMed ID: 30070373)

  • 21. C/EBPβ (CEBPB) protein binding to the C/EBP|CRE DNA 8-mer TTGC|GTCA is inhibited by 5hmC and enhanced by 5mC, 5fC, and 5caC in the CG dinucleotide.
    Sayeed SK; Zhao J; Sathyanarayana BK; Golla JP; Vinson C
    Biochim Biophys Acta; 2015 Jun; 1849(6):583-9. PubMed ID: 25779641
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Analysis of 5-Carboxylcytosine Distribution Using DNA Immunoprecipitation.
    Abakir A; Alenezi F; Ruzov A
    Methods Mol Biol; 2021; 2198():311-319. PubMed ID: 32822041
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Methylation-assisted bisulfite sequencing to simultaneously map 5fC and 5caC on a genome-wide scale for DNA demethylation analysis.
    Neri F; Incarnato D; Krepelova A; Parlato C; Oliviero S
    Nat Protoc; 2016 Jul; 11(7):1191-205. PubMed ID: 27281647
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Distinct and stage-specific contributions of TET1 and TET2 to stepwise cytosine oxidation in the transition from naive to primed pluripotency.
    Mulholland CB; Traube FR; Ugur E; Parsa E; Eckl EM; Schönung M; Modic M; Bartoschek MD; Stolz P; Ryan J; Carell T; Leonhardt H; Bultmann S
    Sci Rep; 2020 Jul; 10(1):12066. PubMed ID: 32694513
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Weakened N3 Hydrogen Bonding by 5-Formylcytosine and 5-Carboxylcytosine Reduces Their Base-Pairing Stability.
    Dai Q; Sanstead PJ; Peng CS; Han D; He C; Tokmakoff A
    ACS Chem Biol; 2016 Feb; 11(2):470-7. PubMed ID: 26641274
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Maternal high-fat diet changes DNA methylation in the early embryo by disrupting the TCA cycle intermediary alpha ketoglutarate.
    Penn A; McPherson N; Fullston T; Arman B; Zander-Fox D
    Reproduction; 2023 Apr; 165(4):347-362. PubMed ID: 36633493
    [TBL] [Abstract][Full Text] [Related]  

  • 27. The hypomethylating agent Decitabine causes a paradoxical increase in 5-hydroxymethylcytosine in human leukemia cells.
    Chowdhury B; McGovern A; Cui Y; Choudhury SR; Cho IH; Cooper B; Chevassut T; Lossie AC; Irudayaraj J
    Sci Rep; 2015 Apr; 5():9281. PubMed ID: 25901663
    [TBL] [Abstract][Full Text] [Related]  

  • 28. 5-hydroxymethylcytosines regulate gene expression as a passive DNA demethylation resisting epigenetic mark in proliferative somatic cells.
    Wei A; Zhang H; Qiu Q; Fabyanic EB; Hu P; Wu H
    bioRxiv; 2023 Sep; ():. PubMed ID: 37808741
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Mapping 5-Hydroxymethylcytosine (5hmC) Modifications in Skeletal Tissues Using High-Throughput Sequencing.
    Grandi FC; Bhutani N
    Methods Mol Biol; 2021; 2221():101-108. PubMed ID: 32979201
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Epigenetic modifications in DNA could mimic oxidative DNA damage: A double-edged sword.
    Ito S; Kuraoka I
    DNA Repair (Amst); 2015 Aug; 32():52-57. PubMed ID: 25956859
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Chemoselective labeling and site-specific mapping of 5-formylcytosine as a cellular nucleic acid modification.
    Dietzsch J; Feineis D; Höbartner C
    FEBS Lett; 2018 Jun; 592(12):2032-2047. PubMed ID: 29683490
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex.
    Wang L; Zhou Y; Xu L; Xiao R; Lu X; Chen L; Chong J; Li H; He C; Fu XD; Wang D
    Nature; 2015 Jul; 523(7562):621-5. PubMed ID: 26123024
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA.
    Hashimoto H; Pais JE; Zhang X; Saleh L; Fu ZQ; Dai N; Corrêa IR; Zheng Y; Cheng X
    Nature; 2014 Feb; 506(7488):391-5. PubMed ID: 24390346
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Bisulfite-free, base-resolution analysis of 5-formylcytosine at the genome scale.
    Xia B; Han D; Lu X; Sun Z; Zhou A; Yin Q; Zeng H; Liu M; Jiang X; Xie W; He C; Yi C
    Nat Methods; 2015 Nov; 12(11):1047-50. PubMed ID: 26344045
    [TBL] [Abstract][Full Text] [Related]  

  • 35. bZIP Dimers CREB1, ATF2, Zta, ATF3|cJun, and cFos|cJun Prefer to Bind to Some Double-Stranded DNA Sequences Containing 5-Formylcytosine and 5-Carboxylcytosine.
    Ray S; Tillo D; Ufot A; Assad N; Durell S; Vinson C
    Biochemistry; 2020 Sep; 59(38):3529-3540. PubMed ID: 32902247
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Direct decarboxylation of ten-eleven translocation-produced 5-carboxylcytosine in mammalian genomes forms a new mechanism for active DNA demethylation.
    Feng Y; Chen JJ; Xie NB; Ding JH; You XJ; Tao WB; Zhang X; Yi C; Zhou X; Yuan BF; Feng YQ
    Chem Sci; 2021 Sep; 12(34):11322-11329. PubMed ID: 34567494
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Mass spectrometry reveals the presence of specific set of epigenetic DNA modifications in the Norway spruce genome.
    Yakovlev IA; Gackowski D; Abakir A; Viejo M; Ruzov A; Olinski R; Starczak M; Fossdal CG; Krutovsky KV
    Sci Rep; 2019 Dec; 9(1):19314. PubMed ID: 31848418
    [TBL] [Abstract][Full Text] [Related]  

  • 38. [Research advances in TET enzyme and its intermediate product 5hmC].
    Wu J; Fang X; Xia X; Zhang M
    Zhong Nan Da Xue Xue Bao Yi Xue Ban; 2019 Apr; 44(4):449-454. PubMed ID: 31113923
    [TBL] [Abstract][Full Text] [Related]  

  • 39. [Oxidation and deamination of nucleobases as an epigenetic tool].
    Guz J; Jurgowiak M; Oliński R
    Postepy Hig Med Dosw (Online); 2012 May; 66():275-86. PubMed ID: 22706113
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Base-resolution profiling of active DNA demethylation using MAB-seq and caMAB-seq.
    Wu H; Wu X; Zhang Y
    Nat Protoc; 2016 Jun; 11(6):1081-100. PubMed ID: 27172168
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 18.