These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

197 related articles for article (PubMed ID: 30082392)

  • 1. Codon usage influences fitness through RNA toxicity.
    Mittal P; Brindle J; Stephen J; Plotkin JB; Kudla G
    Proc Natl Acad Sci U S A; 2018 Aug; 115(34):8639-8644. PubMed ID: 30082392
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Mutations to Less-Preferred Synonymous Codons in a Highly Expressed Gene of Escherichia coli: Fitness and Epistatic Interactions.
    Hauber DJ; Grogan DW; DeBry RW
    PLoS One; 2016; 11(1):e0146375. PubMed ID: 26727272
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Coding-sequence determinants of gene expression in Escherichia coli.
    Kudla G; Murray AW; Tollervey D; Plotkin JB
    Science; 2009 Apr; 324(5924):255-8. PubMed ID: 19359587
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Coevolution of codon usage and transfer RNA abundance.
    Bulmer M
    Nature; 1987 Feb 19-25; 325(6106):728-30. PubMed ID: 2434856
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The close proximity of Escherichia coli genes: consequences for stop codon and synonymous codon use.
    Eyre-Walker A
    J Mol Evol; 1996 Feb; 42(2):73-8. PubMed ID: 8919857
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Correlation of codon bias measures with mRNA levels: analysis of transcriptome data from Escherichia coli.
    Goetz RM; Fuglsang A
    Biochem Biophys Res Commun; 2005 Feb; 327(1):4-7. PubMed ID: 15629421
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Codon influence on protein expression in E. coli correlates with mRNA levels.
    Boël G; Letso R; Neely H; Price WN; Wong KH; Su M; Luff J; Valecha M; Everett JK; Acton TB; Xiao R; Montelione GT; Aalberts DP; Hunt JF
    Nature; 2016 Jan; 529(7586):358-363. PubMed ID: 26760206
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Directed evolution study unveiling key sequence factors that affect translation efficiency in Escherichia coli.
    Tsukuda M; Miyazaki K
    J Biosci Bioeng; 2013 Nov; 116(5):540-5. PubMed ID: 23790548
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Synonymous codon selection controls in vivo turnover and amount of mRNA in Escherichia coli bla and ompA genes.
    Deana A; Ehrlich R; Reiss C
    J Bacteriol; 1996 May; 178(9):2718-20. PubMed ID: 8626345
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The Codon Usage of Lowly Expressed Genes Is Subject to Natural Selection.
    Yannai A; Katz S; Hershberg R
    Genome Biol Evol; 2018 Apr; 10(5):1237-1246. PubMed ID: 29688501
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Codon usage of highly expressed genes affects proteome-wide translation efficiency.
    Frumkin I; Lajoie MJ; Gregg CJ; Hornung G; Church GM; Pilpel Y
    Proc Natl Acad Sci U S A; 2018 May; 115(21):E4940-E4949. PubMed ID: 29735666
    [TBL] [Abstract][Full Text] [Related]  

  • 12. On relevance of codon usage to expression of synthetic and natural genes in Escherichia coli.
    Supek F; Šmuc T
    Genetics; 2010 Jul; 185(3):1129-34. PubMed ID: 20421604
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Synonymous codon usage in Escherichia coli: selection for translational accuracy.
    Stoletzki N; Eyre-Walker A
    Mol Biol Evol; 2007 Feb; 24(2):374-81. PubMed ID: 17101719
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The fitness consequences of synonymous mutations in Escherichia coli: Experimental evidence for a pleiotropic effect of translational selection.
    Ballard A; Bieniek S; Carlini DB
    Gene; 2019 Apr; 694():111-120. PubMed ID: 30738968
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K-12 genome.
    dos Reis M; Wernisch L; Savva R
    Nucleic Acids Res; 2003 Dec; 31(23):6976-85. PubMed ID: 14627830
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Evolution in regulatory regions rapidly compensates the cost of nonoptimal codon usage.
    Amorós-Moya D; Bedhomme S; Hermann M; Bravo IG
    Mol Biol Evol; 2010 Sep; 27(9):2141-51. PubMed ID: 20403964
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Differential codon adaptation between dsDNA and ssDNA phages in Escherichia coli.
    Chithambaram S; Prabhakaran R; Xia X
    Mol Biol Evol; 2014 Jun; 31(6):1606-17. PubMed ID: 24586046
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular bases for strong phenotypic effects of single synonymous codon substitutions in the E. coli ccdB toxin gene.
    Bajaj P; Bhasin M; Varadarajan R
    BMC Genomics; 2023 Dec; 24(1):732. PubMed ID: 38049728
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Revealing determinants of translation efficiency via whole-gene codon randomization and machine learning.
    Nieuwkoop T; Terlouw BR; Stevens KG; Scheltema RA; de Ridder D; van der Oost J; Claassens NJ
    Nucleic Acids Res; 2023 Mar; 51(5):2363-2376. PubMed ID: 36718935
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Codon-usage based regulation of colicin K synthesis by the stress alarmone ppGpp.
    Kuhar I; van Putten JP; Zgur-Bertok D; Gaastra W; Jordi BJ
    Mol Microbiol; 2001 Jul; 41(1):207-16. PubMed ID: 11454213
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.