BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

178 related articles for article (PubMed ID: 30169535)

  • 1. Feasibility of developing reliable gene expression modules from FFPE derived RNA profiled on Affymetrix arrays.
    Jose V; Fumagalli D; Rothé F; Majjaj S; Loi S; Michiels S; Sotiriou C
    PLoS One; 2018; 13(8):e0203346. PubMed ID: 30169535
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Systematic evaluation of RNA quality, microarray data reliability and pathway analysis in fresh, fresh frozen and formalin-fixed paraffin-embedded tissue samples.
    Wimmer I; Tröscher AR; Brunner F; Rubino SJ; Bien CG; Weiner HL; Lassmann H; Bauer J
    Sci Rep; 2018 Apr; 8(1):6351. PubMed ID: 29679021
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A methodological study of genome-wide DNA methylation analyses using matched archival formalin-fixed paraffin embedded and fresh frozen breast tumors.
    Espinal AC; Wang D; Yan L; Liu S; Tang L; Hu Q; Morrison CD; Ambrosone CB; Higgins MJ; Sucheston-Campbell LE
    Oncotarget; 2017 Feb; 8(9):14821-14829. PubMed ID: 28118602
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues.
    Marczyk M; Fu C; Lau R; Du L; Trevarton AJ; Sinn BV; Gould RE; Pusztai L; Hatzis C; Symmans WF
    BMC Cancer; 2019 Dec; 19(1):1189. PubMed ID: 31805884
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Robust transcriptional tumor signatures applicable to both formalin-fixed paraffin-embedded and fresh-frozen samples.
    Chen R; Guan Q; Cheng J; He J; Liu H; Cai H; Hong G; Zhang J; Li N; Ao L; Guo Z
    Oncotarget; 2017 Jan; 8(4):6652-6662. PubMed ID: 28036264
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue.
    Mittempergher L; de Ronde JJ; Nieuwland M; Kerkhoven RM; Simon I; Rutgers EJ; Wessels LF; Van't Veer LJ
    PLoS One; 2011 Feb; 6(2):e17163. PubMed ID: 21347257
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Quantitative expression profiling in formalin-fixed paraffin-embedded samples by affymetrix microarrays.
    Abdueva D; Wing M; Schaub B; Triche T; Davicioni E
    J Mol Diagn; 2010 Jul; 12(4):409-17. PubMed ID: 20522636
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A Method to Correlate mRNA Expression Datasets Obtained from Fresh Frozen and Formalin-Fixed, Paraffin-Embedded Tissue Samples: A Matter of Thresholds.
    Mustafa DA; Sieuwerts AM; Smid M; de Weerd V; van der Weiden M; Meijer-van Gelder ME; Martens JW; Foekens JA; Kros JM
    PLoS One; 2015; 10(12):e0144097. PubMed ID: 26716838
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparison of triple-negative breast cancer molecular subtyping using RNA from matched fresh-frozen versus formalin-fixed paraffin-embedded tissue.
    Jovanović B; Sheng Q; Seitz RS; Lawrence KD; Morris SW; Thomas LR; Hout DR; Schweitzer BL; Guo Y; Pietenpol JA; Lehmann BD
    BMC Cancer; 2017 Apr; 17(1):241. PubMed ID: 28376728
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Whole-Transcriptome profiling of formalin-fixed, paraffin-embedded renal cell carcinoma by RNA-seq.
    Li P; Conley A; Zhang H; Kim HL
    BMC Genomics; 2014 Dec; 15(1):1087. PubMed ID: 25495041
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues.
    Kibriya MG; Jasmine F; Roy S; Paul-Brutus RM; Argos M; Ahsan H
    BMC Genomics; 2010 Nov; 11():622. PubMed ID: 21059268
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.
    Webster AF; Zumbo P; Fostel J; Gandara J; Hester SD; Recio L; Williams A; Wood CE; Yauk CL; Mason CE
    Toxicol Sci; 2015 Dec; 148(2):460-72. PubMed ID: 26361796
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Identification and validation of differentially expressed transcripts by RNA-sequencing of formalin-fixed, paraffin-embedded (FFPE) lung tissue from patients with Idiopathic Pulmonary Fibrosis.
    Vukmirovic M; Herazo-Maya JD; Blackmon J; Skodric-Trifunovic V; Jovanovic D; Pavlovic S; Stojsic J; Zeljkovic V; Yan X; Homer R; Stefanovic B; Kaminski N
    BMC Pulm Med; 2017 Jan; 17(1):15. PubMed ID: 28081703
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.
    Zhao W; He X; Hoadley KA; Parker JS; Hayes DN; Perou CM
    BMC Genomics; 2014 Jun; 15(1):419. PubMed ID: 24888378
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Preparation of archival formalin-fixed paraffin-embedded mouse liver samples for use with the Agilent gene expression microarray platform.
    Jackson AF; Williams A; Moffat I; Phillips SL; Recio L; Waters MD; Lambert IB; Yauk CL
    J Pharmacol Toxicol Methods; 2013; 68(2):260-268. PubMed ID: 23458726
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Gene expression profiles of gliomas in formalin-fixed paraffin-embedded material.
    Gravendeel LA; de Rooi JJ; Eilers PH; van den Bent MJ; Sillevis Smitt PA; French PJ
    Br J Cancer; 2012 Jan; 106(3):538-45. PubMed ID: 22187034
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Clinical relevance of DNA microarray analyses using archival formalin-fixed paraffin-embedded breast cancer specimens.
    Sadi AM; Wang DY; Youngson BJ; Miller N; Boerner S; Done SJ; Leong WL
    BMC Cancer; 2011 Jun; 11():253:1-13. PubMed ID: 21679412
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Whole-genome gene expression profiling of formalin-fixed, paraffin-embedded tissue samples.
    April C; Klotzle B; Royce T; Wickham-Garcia E; Boyaniwsky T; Izzo J; Cox D; Jones W; Rubio R; Holton K; Matulonis U; Quackenbush J; Fan JB
    PLoS One; 2009 Dec; 4(12):e8162. PubMed ID: 19997620
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples.
    Nasri S; Anjomshoaa A; Song S; Guilford P; McNoe L; Black M; Phillips V; Reeve A; Humar B
    Cancer Genet Cytogenet; 2010 Apr; 198(1):1-6. PubMed ID: 20303007
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Gene expression profiling of RNA extracted from FFPE tissues: NuGEN technologies' whole-transcriptome amplification system.
    Turner L; Heath JD; Kurn N
    Methods Mol Biol; 2011; 724():269-80. PubMed ID: 21370019
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.