649 related articles for article (PubMed ID: 30185233)
21. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
Abellan-Schneyder I; Matchado MS; Reitmeier S; Sommer A; Sewald Z; Baumbach J; List M; Neuhaus K
mSphere; 2021 Feb; 6(1):. PubMed ID: 33627512
[TBL] [Abstract][Full Text] [Related]
22. Comprehensive Assessment of 16S rRNA Gene Amplicon Sequencing for Microbiome Profiling across Multiple Habitats.
Zhang W; Fan X; Shi H; Li J; Zhang M; Zhao J; Su X
Microbiol Spectr; 2023 Jun; 11(3):e0056323. PubMed ID: 37102867
[TBL] [Abstract][Full Text] [Related]
23. High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution.
Callahan BJ; Wong J; Heiner C; Oh S; Theriot CM; Gulati AS; McGill SK; Dougherty MK
Nucleic Acids Res; 2019 Oct; 47(18):e103. PubMed ID: 31269198
[TBL] [Abstract][Full Text] [Related]
24. High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota.
Dreier M; Meola M; Berthoud H; Shani N; Wechsler D; Junier P
BMC Microbiol; 2022 Feb; 22(1):48. PubMed ID: 35130830
[TBL] [Abstract][Full Text] [Related]
25. Profiling of Oral Bacterial Communities.
Wade WG; Prosdocimi EM
J Dent Res; 2020 Jun; 99(6):621-629. PubMed ID: 32286907
[TBL] [Abstract][Full Text] [Related]
26. Amplicon-based skin microbiome profiles collected by tape stripping with different adhesive film dressings: a comparative study.
Ogai K; Shibata K; Takahashi N; Ogura K; Okamoto S; Sugama J
BMC Microbiol; 2021 Feb; 21(1):54. PubMed ID: 33602131
[TBL] [Abstract][Full Text] [Related]
27. Profiling bacterial communities by MinION sequencing of ribosomal operons.
Kerkhof LJ; Dillon KP; Häggblom MM; McGuinness LR
Microbiome; 2017 Sep; 5(1):116. PubMed ID: 28911333
[TBL] [Abstract][Full Text] [Related]
28. Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing.
Shahi SK; Zarei K; Guseva NV; Mangalam AK
J Vis Exp; 2019 Oct; (152):. PubMed ID: 31680682
[TBL] [Abstract][Full Text] [Related]
29. Amplicon Sequence Variants Artificially Split Bacterial Genomes into Separate Clusters.
Schloss PD
mSphere; 2021 Aug; 6(4):e0019121. PubMed ID: 34287003
[TBL] [Abstract][Full Text] [Related]
30. Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies.
Hong BY; Driscoll M; Gratalo D; Jarvie T; Weinstock GM
Int J Mol Sci; 2024 Mar; 25(5):. PubMed ID: 38474213
[TBL] [Abstract][Full Text] [Related]
31. Host DNA depletion efficiency of microbiome DNA enrichment methods in infected tissue samples.
Heravi FS; Zakrzewski M; Vickery K; Hu H
J Microbiol Methods; 2020 Mar; 170():105856. PubMed ID: 32007505
[TBL] [Abstract][Full Text] [Related]
32. Managing Contamination and Diverse Bacterial Loads in 16S rRNA Deep Sequencing of Clinical Samples: Implications of the Law of Small Numbers.
Dyrhovden R; Rippin M; Øvrebø KK; Nygaard RM; Ulvestad E; Kommedal Ø
mBio; 2021 Jun; 12(3):e0059821. PubMed ID: 34101489
[TBL] [Abstract][Full Text] [Related]
33. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis.
Johnson JS; Spakowicz DJ; Hong BY; Petersen LM; Demkowicz P; Chen L; Leopold SR; Hanson BM; Agresta HO; Gerstein M; Sodergren E; Weinstock GM
Nat Commun; 2019 Nov; 10(1):5029. PubMed ID: 31695033
[TBL] [Abstract][Full Text] [Related]
34. Processing a 16S rRNA Sequencing Dataset with the Microbiome Helper Workflow.
Douglas GM; Comeau AM; Langille MGI
Methods Mol Biol; 2018; 1849():131-141. PubMed ID: 30298252
[TBL] [Abstract][Full Text] [Related]
35. Generating amplicon reads for microbial community assessment with next-generation sequencing.
Gołębiewski M; Tretyn A
J Appl Microbiol; 2020 Feb; 128(2):330-354. PubMed ID: 31299126
[TBL] [Abstract][Full Text] [Related]
36. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
37. Species identification and profiling of complex microbial communities using shotgun Illumina sequencing of 16S rRNA amplicon sequences.
Ong SH; Kukkillaya VU; Wilm A; Lay C; Ho EX; Low L; Hibberd ML; Nagarajan N
PLoS One; 2013; 8(4):e60811. PubMed ID: 23579286
[TBL] [Abstract][Full Text] [Related]
38. Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing.
Ranjan R; Rani A; Metwally A; McGee HS; Perkins DL
Biochem Biophys Res Commun; 2016 Jan; 469(4):967-77. PubMed ID: 26718401
[TBL] [Abstract][Full Text] [Related]
39. Amplicon Sequencing of Single-Copy Protein-Coding Genes Reveals Accurate Diversity for Sequence-Discrete Microbiome Populations.
Yang C; Su Q; Tang M; Luo S; Zheng H; Zhang X; Zhou X
Microbiol Spectr; 2022 Apr; 10(2):e0210521. PubMed ID: 35416715
[TBL] [Abstract][Full Text] [Related]
40. In Silico and Experimental Evaluation of Primer Sets for Species-Level Resolution of the Vaginal Microbiota Using 16S Ribosomal RNA Gene Sequencing.
Van Der Pol WJ; Kumar R; Morrow CD; Blanchard EE; Taylor CM; Martin DH; Lefkowitz EJ; Muzny CA
J Infect Dis; 2019 Jan; 219(2):305-314. PubMed ID: 30535155
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]