773 related articles for article (PubMed ID: 30201725)
1. Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA.
Volden R; Palmer T; Byrne A; Cole C; Schmitz RJ; Green RE; Vollmers C
Proc Natl Acad Sci U S A; 2018 Sep; 115(39):9726-9731. PubMed ID: 30201725
[TBL] [Abstract][Full Text] [Related]
2. Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2.
Zee A; Deng DZQ; Adams M; Schimke KD; Corbett-Detig R; Russell SL; Zhang X; Schmitz RJ; Vollmers C
Genome Res; 2022; 32(11-12):2092-2106. PubMed ID: 36351772
[TBL] [Abstract][Full Text] [Related]
3. Tracking Alternatively Spliced Isoforms from Long Reads by SpliceHunter.
Kuang Z; Canzar S
Methods Mol Biol; 2018; 1751():73-88. PubMed ID: 29508290
[TBL] [Abstract][Full Text] [Related]
4. Transcript Profiling Using Long-Read Sequencing Technologies.
Bayega A; Wang YC; Oikonomopoulos S; Djambazian H; Fahiminiya S; Ragoussis J
Methods Mol Biol; 2018; 1783():121-147. PubMed ID: 29767360
[TBL] [Abstract][Full Text] [Related]
5. Sequencing of individual barcoded cDNAs using Pacific Biosciences and Oxford Nanopore Technologies reveals platform-specific error patterns.
Mikheenko A; Prjibelski AD; Joglekar A; Tilgner HU
Genome Res; 2022 Apr; 32(4):726-737. PubMed ID: 35301264
[TBL] [Abstract][Full Text] [Related]
6. The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.
Zhang T; Li H; Ma S; Cao J; Liao H; Huang Q; Chen W
Appl Environ Microbiol; 2023 Oct; 89(10):e0060523. PubMed ID: 37800969
[TBL] [Abstract][Full Text] [Related]
7. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
[TBL] [Abstract][Full Text] [Related]
8. Full-length isoform concatenation sequencing to resolve cancer transcriptome complexity.
Wijeratne S; Gonzalez MEH; Roach K; Miller KE; Schieffer KM; Fitch JR; Leonard J; White P; Kelly BJ; Cottrell CE; Mardis ER; Wilson RK; Miller AR
BMC Genomics; 2024 Jan; 25(1):122. PubMed ID: 38287261
[TBL] [Abstract][Full Text] [Related]
9. High-throughput RNA isoform sequencing using programmed cDNA concatenation.
Al'Khafaji AM; Smith JT; Garimella KV; Babadi M; Popic V; Sade-Feldman M; Gatzen M; Sarkizova S; Schwartz MA; Blaum EM; Day A; Costello M; Bowers T; Gabriel S; Banks E; Philippakis AA; Boland GM; Blainey PC; Hacohen N
Nat Biotechnol; 2024 Apr; 42(4):582-586. PubMed ID: 37291427
[TBL] [Abstract][Full Text] [Related]
10. Depletion of Hemoglobin Transcripts and Long-Read Sequencing Improves the Transcriptome Annotation of the Polar Bear (
Byrne A; Supple MA; Volden R; Laidre KL; Shapiro B; Vollmers C
Front Genet; 2019; 10():643. PubMed ID: 31379921
[TBL] [Abstract][Full Text] [Related]
11. R2C2+UMI: Combining concatemeric consensus sequencing with unique molecular identifiers enables ultra-accurate sequencing of amplicons on Oxford Nanopore Technologies sequencers.
Deng DZQ; Verhage J; Neudorf C; Corbett-Detig R; Mekonen H; Castaldi PJ; Vollmers C
bioRxiv; 2023 Aug; ():. PubMed ID: 37662385
[TBL] [Abstract][Full Text] [Related]
12. High-throughput and high-accuracy single-cell RNA isoform analysis using PacBio circular consensus sequencing.
Shi ZX; Chen ZC; Zhong JY; Hu KH; Zheng YF; Chen Y; Xie SQ; Bo XC; Luo F; Tang C; Xiao CL; Liu YZ
Nat Commun; 2023 May; 14(1):2631. PubMed ID: 37149708
[TBL] [Abstract][Full Text] [Related]
13. Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules.
Sessegolo C; Cruaud C; Da Silva C; Cologne A; Dubarry M; Derrien T; Lacroix V; Aury JM
Sci Rep; 2019 Oct; 9(1):14908. PubMed ID: 31624302
[TBL] [Abstract][Full Text] [Related]
14. Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacific Biosciences Sequel II system and ultralong reads of Oxford Nanopore.
Lang D; Zhang S; Ren P; Liang F; Sun Z; Meng G; Tan Y; Li X; Lai Q; Han L; Wang D; Hu F; Wang W; Liu S
Gigascience; 2020 Dec; 9(12):. PubMed ID: 33319909
[TBL] [Abstract][Full Text] [Related]
15. Accurate identification and analysis of human mRNA isoforms using deep long read sequencing.
Tilgner H; Raha D; Habegger L; Mohiuddin M; Gerstein M; Snyder M
G3 (Bethesda); 2013 Mar; 3(3):387-97. PubMed ID: 23450794
[TBL] [Abstract][Full Text] [Related]
16. Adaptation of Oxford Nanopore technology for hepatitis C whole genome sequencing and identification of within-host viral variants.
Riaz N; Leung P; Barton K; Smith MA; Carswell S; Bull R; Lloyd AR; Rodrigo C
BMC Genomics; 2021 Mar; 22(1):148. PubMed ID: 33653280
[TBL] [Abstract][Full Text] [Related]
17. A
Ramberg S; Høyheim B; Østbye TK; Andreassen R
Front Genet; 2021; 12():656334. PubMed ID: 33986770
[TBL] [Abstract][Full Text] [Related]
18. Analysis and comprehensive comparison of PacBio and nanopore-based RNA sequencing of the
Cui J; Shen N; Lu Z; Xu G; Wang Y; Jin B
Plant Methods; 2020; 16():85. PubMed ID: 32536962
[TBL] [Abstract][Full Text] [Related]
19. PacBio full-length cDNA sequencing integrated with RNA-seq reads drastically improves the discovery of splicing transcripts in rice.
Zhang G; Sun M; Wang J; Lei M; Li C; Zhao D; Huang J; Li W; Li S; Li J; Yang J; Luo Y; Hu S; Zhang B
Plant J; 2019 Jan; 97(2):296-305. PubMed ID: 30288819
[TBL] [Abstract][Full Text] [Related]
20. Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations.
Oikonomopoulos S; Wang YC; Djambazian H; Badescu D; Ragoussis J
Sci Rep; 2016 Aug; 6():31602. PubMed ID: 27554526
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]