325 related articles for article (PubMed ID: 30220560)
1. Efficient and Accurate Quantitative Profiling of Alternative Splicing Patterns of Any Complexity on a Laptop.
Sterne-Weiler T; Weatheritt RJ; Best AJ; Ha KCH; Blencowe BJ
Mol Cell; 2018 Oct; 72(1):187-200.e6. PubMed ID: 30220560
[TBL] [Abstract][Full Text] [Related]
2. ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events.
Denti L; Rizzi R; Beretta S; Vedova GD; Previtali M; Bonizzoni P
BMC Bioinformatics; 2018 Nov; 19(1):444. PubMed ID: 30458725
[TBL] [Abstract][Full Text] [Related]
3. Design of RNA splicing analysis null models for post hoc filtering of Drosophila head RNA-Seq data with the splicing analysis kit (Spanki).
Sturgill D; Malone JH; Sun X; Smith HE; Rabinow L; Samson ML; Oliver B
BMC Bioinformatics; 2013 Nov; 14():320. PubMed ID: 24209455
[TBL] [Abstract][Full Text] [Related]
4. Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.
Pan Q; Shai O; Lee LJ; Frey BJ; Blencowe BJ
Nat Genet; 2008 Dec; 40(12):1413-5. PubMed ID: 18978789
[TBL] [Abstract][Full Text] [Related]
5. Universal Alternative Splicing of Noncoding Exons.
Deveson IW; Brunck ME; Blackburn J; Tseng E; Hon T; Clark TA; Clark MB; Crawford J; Dinger ME; Nielsen LK; Mattick JS; Mercer TR
Cell Syst; 2018 Feb; 6(2):245-255.e5. PubMed ID: 29396323
[TBL] [Abstract][Full Text] [Related]
6. Studying Isoform-Specific mRNA Recruitment to Polyribosomes with Frac-seq.
Martinez-Nunez RT; Sanford JR
Methods Mol Biol; 2016; 1358():99-108. PubMed ID: 26463379
[TBL] [Abstract][Full Text] [Related]
7. Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome.
Tilgner H; Jahanbani F; Gupta I; Collier P; Wei E; Rasmussen M; Snyder M
Genome Res; 2018 Feb; 28(2):231-242. PubMed ID: 29196558
[TBL] [Abstract][Full Text] [Related]
8. The Usage of Exon-Exon Splice Junctions for the Detection of Alternative Splicing using the REIDS model.
Van Moerbeke M; Kasim A; Shkedy Z
Sci Rep; 2018 May; 8(1):8331. PubMed ID: 29844567
[TBL] [Abstract][Full Text] [Related]
9. Isoform Evolution in Primates through Independent Combination of Alternative RNA Processing Events.
Zhang SJ; Wang C; Yan S; Fu A; Luan X; Li Y; Sunny Shen Q; Zhong X; Chen JY; Wang X; Chin-Ming Tan B; He A; Li CY
Mol Biol Evol; 2017 Oct; 34(10):2453-2468. PubMed ID: 28957512
[TBL] [Abstract][Full Text] [Related]
10. Transcriptome Sequencing: RNA-Seq.
Zhang H; He L; Cai L
Methods Mol Biol; 2018; 1754():15-27. PubMed ID: 29536435
[TBL] [Abstract][Full Text] [Related]
11. Alternative splicing, RNA-seq and drug discovery.
Zhao S
Drug Discov Today; 2019 Jun; 24(6):1258-1267. PubMed ID: 30953866
[TBL] [Abstract][Full Text] [Related]
12. Fast and furious: insights of back splicing regulation during nascent RNA synthesis.
Xue W; Ma XK; Yang L
Sci China Life Sci; 2021 Jul; 64(7):1050-1061. PubMed ID: 33580425
[TBL] [Abstract][Full Text] [Related]
13. Identifying differential alternative splicing events from RNA sequencing data using RNASeq-MATS.
Park JW; Tokheim C; Shen S; Xing Y
Methods Mol Biol; 2013; 1038():171-9. PubMed ID: 23872975
[TBL] [Abstract][Full Text] [Related]
14. Deep RNA sequencing reveals a high frequency of alternative splicing events in the fungus Trichoderma longibrachiatum.
Xie BB; Li D; Shi WL; Qin QL; Wang XW; Rong JC; Sun CY; Huang F; Zhang XY; Dong XW; Chen XL; Zhou BC; Zhang YZ; Song XY
BMC Genomics; 2015 Feb; 16(1):54. PubMed ID: 25652134
[TBL] [Abstract][Full Text] [Related]
15. Discovery of novel genes and gene isoforms by integrating transcriptomic and proteomic profiling from mouse liver.
Wu P; Zhang H; Lin W; Hao Y; Ren L; Zhang C; Li N; Wei H; Jiang Y; He F
J Proteome Res; 2014 May; 13(5):2409-19. PubMed ID: 24717071
[TBL] [Abstract][Full Text] [Related]
16. Profiling Novel Alternative Splicing within Multiple Tissues Provides Useful Insights into Porcine Genome Annotation.
Feng W; Zhao P; Zheng X; Hu Z; Liu J
Genes (Basel); 2020 Nov; 11(12):. PubMed ID: 33255998
[TBL] [Abstract][Full Text] [Related]
17. Widespread splicing of repetitive element loci into coding regions of gene transcripts.
Darby MM; Leek JT; Langmead B; Yolken RH; Sabunciyan S
Hum Mol Genet; 2016 Nov; 25(22):4962-4982. PubMed ID: 28171598
[TBL] [Abstract][Full Text] [Related]
18. Whole Transcriptome Profiling: An RNA-Seq Primer and Implications for Pharmacogenomics Research.
Sá ACC; Sadee W; Johnson JA
Clin Transl Sci; 2018 Mar; 11(2):153-161. PubMed ID: 28945944
[No Abstract] [Full Text] [Related]
19. Determination of Alternate Splicing Events Using Transcriptome Arrays.
DeVaux RS; Kuentzel M; Herschkowitz J; Chittur SV
Methods Mol Biol; 2017; 1507():245-259. PubMed ID: 27832545
[TBL] [Abstract][Full Text] [Related]
20. Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens.
Liao W; Jordaan G; Nham P; Phan RT; Pelegrini M; Sharma S
BMC Cancer; 2015 Oct; 15():714. PubMed ID: 26474785
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]