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3. Most human introns are recognized via multiple and tissue-specific branchpoints. Pineda JMB; Bradley RK Genes Dev; 2018 Apr; 32(7-8):577-591. PubMed ID: 29666160 [TBL] [Abstract][Full Text] [Related]
4. Predicting human splicing branchpoints by combining sequence-derived features and multi-label learning methods. Zhang W; Zhu X; Fu Y; Tsuji J; Weng Z BMC Bioinformatics; 2017 Dec; 18(Suppl 13):464. PubMed ID: 29219070 [TBL] [Abstract][Full Text] [Related]
5. Machine learning annotation of human branchpoints. Signal B; Gloss BS; Dinger ME; Mercer TR Bioinformatics; 2018 Mar; 34(6):920-927. PubMed ID: 29092009 [TBL] [Abstract][Full Text] [Related]
6. Predicting Splicing from Primary Sequence with Deep Learning. Jaganathan K; Kyriazopoulou Panagiotopoulou S; McRae JF; Darbandi SF; Knowles D; Li YI; Kosmicki JA; Arbelaez J; Cui W; Schwartz GB; Chow ED; Kanterakis E; Gao H; Kia A; Batzoglou S; Sanders SJ; Farh KK Cell; 2019 Jan; 176(3):535-548.e24. PubMed ID: 30661751 [TBL] [Abstract][Full Text] [Related]
7. Human GC-AG alternative intron isoforms with weak donor sites show enhanced consensus at acceptor exon positions. Thanaraj TA; Clark F Nucleic Acids Res; 2001 Jun; 29(12):2581-93. PubMed ID: 11410667 [TBL] [Abstract][Full Text] [Related]
8. Computational analysis of splicing errors and mutations in human transcripts. Kurmangaliyev YZ; Gelfand MS BMC Genomics; 2008 Jan; 9():13. PubMed ID: 18194514 [TBL] [Abstract][Full Text] [Related]
9. Mutational analysis of a plant branchpoint and polypyrimidine tract required for constitutive splicing of a mini-exon. Simpson CG; Thow G; Clark GP; Jennings SN; Watters JA; Brown JW RNA; 2002 Jan; 8(1):47-56. PubMed ID: 11873758 [TBL] [Abstract][Full Text] [Related]
10. CADD-Splice-improving genome-wide variant effect prediction using deep learning-derived splice scores. Rentzsch P; Schubach M; Shendure J; Kircher M Genome Med; 2021 Feb; 13(1):31. PubMed ID: 33618777 [TBL] [Abstract][Full Text] [Related]
11. Cancer-associated SF3B1 mutations affect alternative splicing by promoting alternative branchpoint usage. Alsafadi S; Houy A; Battistella A; Popova T; Wassef M; Henry E; Tirode F; Constantinou A; Piperno-Neumann S; Roman-Roman S; Dutertre M; Stern MH Nat Commun; 2016 Feb; 7():10615. PubMed ID: 26842708 [TBL] [Abstract][Full Text] [Related]
12. RS domain-splicing signal interactions in splicing of U12-type and U2-type introns. Shen H; Green MR Nat Struct Mol Biol; 2007 Jul; 14(7):597-603. PubMed ID: 17603499 [TBL] [Abstract][Full Text] [Related]
13. Splicing of constitutive upstream introns is essential for the recognition of intra-exonic suboptimal splice sites in the thrombopoietin gene. Romano M; Marcucci R; Baralle FE Nucleic Acids Res; 2001 Feb; 29(4):886-94. PubMed ID: 11160920 [TBL] [Abstract][Full Text] [Related]
14. The low information content of Neurospora splicing signals: implications for RNA splicing and intron origin. Collins RA; Stajich JE; Field DJ; Olive JE; DeAbreu DM RNA; 2015 May; 21(5):997-1004. PubMed ID: 25805857 [TBL] [Abstract][Full Text] [Related]
15. Deep RNA sequencing reveals a high frequency of alternative splicing events in the fungus Trichoderma longibrachiatum. Xie BB; Li D; Shi WL; Qin QL; Wang XW; Rong JC; Sun CY; Huang F; Zhang XY; Dong XW; Chen XL; Zhou BC; Zhang YZ; Song XY BMC Genomics; 2015 Feb; 16(1):54. PubMed ID: 25652134 [TBL] [Abstract][Full Text] [Related]
16. Intronic PAH gene mutations cause a splicing defect by a novel mechanism involving U1snRNP binding downstream of the 5' splice site. Martínez-Pizarro A; Dembic M; Pérez B; Andresen BS; Desviat LR PLoS Genet; 2018 Apr; 14(4):e1007360. PubMed ID: 29684050 [TBL] [Abstract][Full Text] [Related]
17. Pseudoexon activation in disease by non-splice site deep intronic sequence variation - wild type pseudoexons constitute high-risk sites in the human genome. Petersen USS; Doktor TK; Andresen BS Hum Mutat; 2022 Feb; 43(2):103-127. PubMed ID: 34837434 [TBL] [Abstract][Full Text] [Related]
18. An intronic splicing enhancer binds U1 snRNPs to enhance splicing and select 5' splice sites. McCullough AJ; Berget SM Mol Cell Biol; 2000 Dec; 20(24):9225-35. PubMed ID: 11094074 [TBL] [Abstract][Full Text] [Related]
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20. Intrasplicing coordinates alternative first exons with alternative splicing in the protein 4.1R gene. Parra MK; Tan JS; Mohandas N; Conboy JG EMBO J; 2008 Jan; 27(1):122-31. PubMed ID: 18079699 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]