240 related articles for article (PubMed ID: 30224643)
21. Genome-wide analysis of noncoding regulatory mutations in cancer.
Weinhold N; Jacobsen A; Schultz N; Sander C; Lee W
Nat Genet; 2014 Nov; 46(11):1160-5. PubMed ID: 25261935
[TBL] [Abstract][Full Text] [Related]
22. Promoter-based identification of novel non-coding RNAs reveals the presence of dicistronic snoRNA-miRNA genes in Arabidopsis thaliana.
Qu G; Kruszka K; Plewka P; Yang SY; Chiou TJ; Jarmolowski A; Szweykowska-Kulinska Z; Echeverria M; Karlowski WM
BMC Genomics; 2015 Nov; 16():1009. PubMed ID: 26607788
[TBL] [Abstract][Full Text] [Related]
23. Nucleome Analysis Reveals Structure-Function Relationships for Colon Cancer.
Seaman L; Chen H; Brown M; Wangsa D; Patterson G; Camps J; Omenn GS; Ried T; Rajapakse I
Mol Cancer Res; 2017 Jul; 15(7):821-830. PubMed ID: 28258094
[TBL] [Abstract][Full Text] [Related]
24. Amplicon genome fishing (AGF): a rapid and efficient method for sequencing target cis-regulatory regions in nonmodel organisms.
Gu H; Zhang P; Xu M; Liang D
Mol Genet Genomics; 2021 May; 296(3):527-539. PubMed ID: 33797587
[TBL] [Abstract][Full Text] [Related]
25. Discovering sequences with potential regulatory characteristics.
Bina M; Wyss P; Lazarus SA; Shah SR; Ren W; Szpankowski W; Crawford GE; Park SP; Song XC
Genomics; 2009 Apr; 93(4):314-22. PubMed ID: 19084590
[TBL] [Abstract][Full Text] [Related]
26. Detection of Short-Range DNA Interactions in Mammalian Cells Using High-Resolution Circular Chromosome Conformation Capture Coupled to Deep Sequencing.
Millau JF; Gaudreau L
Methods Mol Biol; 2015; 1334():245-59. PubMed ID: 26404155
[TBL] [Abstract][Full Text] [Related]
27. A universal algorithm for genome-wide in silicio identification of biologically significant gene promoter putative cis-regulatory-elements; identification of new elements for reactive oxygen species and sucrose signaling in Arabidopsis.
Geisler M; Kleczkowski LA; Karpinski S
Plant J; 2006 Feb; 45(3):384-98. PubMed ID: 16412085
[TBL] [Abstract][Full Text] [Related]
28. Exploring the function of genetic variants in the non-coding genomic regions: approaches for identifying human regulatory variants affecting gene expression.
Li MJ; Yan B; Sham PC; Wang J
Brief Bioinform; 2015 May; 16(3):393-412. PubMed ID: 24916300
[TBL] [Abstract][Full Text] [Related]
29. Cancer regulatory variation.
Hennessey RC; Brown KM
Curr Opin Genet Dev; 2021 Feb; 66():41-49. PubMed ID: 33422949
[TBL] [Abstract][Full Text] [Related]
30. Chromosome conformation capture uncovers potential genome-wide interactions between human conserved non-coding sequences.
Robyr D; Friedli M; Gehrig C; Arcangeli M; Marin M; Guipponi M; Farinelli L; Barde I; Verp S; Trono D; Antonarakis SE
PLoS One; 2011 Mar; 6(3):e17634. PubMed ID: 21408183
[TBL] [Abstract][Full Text] [Related]
31. Iteratively improving Hi-C experiments one step at a time.
Golloshi R; Sanders JT; McCord RP
Methods; 2018 Jun; 142():47-58. PubMed ID: 29723572
[TBL] [Abstract][Full Text] [Related]
32. Massively parallel quantification of the regulatory effects of noncoding genetic variation in a human cohort.
Vockley CM; Guo C; Majoros WH; Nodzenski M; Scholtens DM; Hayes MG; Lowe WL; Reddy TE
Genome Res; 2015 Aug; 25(8):1206-14. PubMed ID: 26084464
[TBL] [Abstract][Full Text] [Related]
33. The impact of different negative training data on regulatory sequence predictions.
Krützfeldt LM; Schubach M; Kircher M
PLoS One; 2020; 15(12):e0237412. PubMed ID: 33259518
[TBL] [Abstract][Full Text] [Related]
34. Improved Prediction of Regulatory Element Using Hybrid Abelian Complexity Features with DNA Sequences.
Wu C; Chen J; Liu Y; Hu X
Int J Mol Sci; 2019 Apr; 20(7):. PubMed ID: 30959806
[No Abstract] [Full Text] [Related]
35. De novo prediction of cis-regulatory elements and modules through integrative analysis of a large number of ChIP datasets.
Niu M; Tabari ES; Su Z
BMC Genomics; 2014 Dec; 15():1047. PubMed ID: 25442502
[TBL] [Abstract][Full Text] [Related]
36. Systems-wide Identification of cis-Regulatory Elements in Proteins.
Yeon JH; Heinkel F; Sung M; Na D; Gsponer J
Cell Syst; 2016 Feb; 2(2):89-100. PubMed ID: 27135163
[TBL] [Abstract][Full Text] [Related]
37. Whole-Exome Sequencing Analyses of Inflammatory Bowel Disease-Associated Colorectal Cancers.
Robles AI; Traverso G; Zhang M; Roberts NJ; Khan MA; Joseph C; Lauwers GY; Selaru FM; Popoli M; Pittman ME; Ke X; Hruban RH; Meltzer SJ; Kinzler KW; Vogelstein B; Harris CC; Papadopoulos N
Gastroenterology; 2016 Apr; 150(4):931-43. PubMed ID: 26764183
[TBL] [Abstract][Full Text] [Related]
38. In Situ Hi-C for Plants: An Improved Method to Detect Long-Range Chromatin Interactions.
Padmarasu S; Himmelbach A; Mascher M; Stein N
Methods Mol Biol; 2019; 1933():441-472. PubMed ID: 30945203
[TBL] [Abstract][Full Text] [Related]
39. Non-coding transcription at cis-regulatory elements: computational and experimental approaches.
Simonatto M; Barozzi I; Natoli G
Methods; 2013 Sep; 63(1):66-75. PubMed ID: 23542771
[TBL] [Abstract][Full Text] [Related]
40. Composition-sensitive analysis of the human genome for regulatory signals.
Kel-Margoulis OV; Tchekmenev D; Kel AE; Goessling E; Hornischer K; Lewicki-Potapov B; Wingender E
In Silico Biol; 2003; 3(1-2):145-71. PubMed ID: 12954097
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]